Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC061975.8-201ENST00000587058 721 ntBASIC3.73□□□□□ -1.81
SNX3O60493 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.73□□□□□ -1.81
SNX3O60493 AC022146.1-201ENST00000595307 847 ntBASIC3.73□□□□□ -1.81
SNX3O60493 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.73□□□□□ -1.81
SNX3O60493 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SNX3O60493 AC025588.3-201ENST00000604182 274 ntBASIC3.73□□□□□ -1.81
SNX3O60493 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.73□□□□□ -1.81
SNX3O60493 AC080013.3-201ENST00000606839 578 ntBASIC3.73□□□□□ -1.81
SNX3O60493 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.73□□□□□ -1.81
SNX3O60493 AC131235.4-201ENST00000609288 620 ntBASIC3.73□□□□□ -1.81
SNX3O60493 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.73□□□□□ -1.81
SNX3O60493 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
SNX3O60493 AC008083.4-201ENST00000615076 444 ntBASIC3.73□□□□□ -1.81
SNX3O60493 AC090510.2-201ENST00000617465 629 ntBASIC3.73□□□□□ -1.81
SNX3O60493 AC069209.1-201ENST00000619282 651 ntBASIC3.73□□□□□ -1.81
SNX3O60493 AC109809.1-201ENST00000619665 545 ntBASIC3.73□□□□□ -1.81
SNX3O60493 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.73□□□□□ -1.81
SNX3O60493 AC079684.1-201ENST00000621405 437 ntBASIC3.73□□□□□ -1.81
SNX3O60493 WDR75-207ENST00000631047 270 ntTSL 5 BASIC3.73□□□□□ -1.81
SNX3O60493 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SNX3O60493 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SNX3O60493 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.73□□□□□ -1.81
SNX3O60493 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
SNX3O60493 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.73□□□□□ -1.81
SNX3O60493 CDR1-202ENST00000625883 1485 ntBASIC3.73□□□□□ -1.81
SNX3O60493 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
SNX3O60493 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SNX3O60493 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.72□□□□□ -1.81
SNX3O60493 PABPC1P7-201ENST00000413177 1513 ntBASIC3.72□□□□□ -1.81
SNX3O60493 RNU6-216P-201ENST00000363282 104 ntBASIC3.72□□□□□ -1.81
SNX3O60493 RNU4-28P-201ENST00000364739 141 ntBASIC3.72□□□□□ -1.81
SNX3O60493 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
SNX3O60493 RNU6-356P-201ENST00000384140 107 ntBASIC3.72□□□□□ -1.81
SNX3O60493 SNORA51.6-201ENST00000384151 125 ntBASIC3.72□□□□□ -1.81
SNX3O60493 RNU6-83P-201ENST00000384568 112 ntBASIC3.72□□□□□ -1.81
SNX3O60493 MIR506-201ENST00000384998 124 ntBASIC3.72□□□□□ -1.81
SNX3O60493 MIR323B-201ENST00000385269 82 ntBASIC3.72□□□□□ -1.81
SNX3O60493 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SNX3O60493 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.72□□□□□ -1.81
SNX3O60493 RN7SKP278-201ENST00000410504 342 ntBASIC3.72□□□□□ -1.81
SNX3O60493 OR8G2P-201ENST00000412796 908 ntBASIC3.72□□□□□ -1.81
SNX3O60493 HIGD1AP15-201ENST00000416198 280 ntBASIC3.72□□□□□ -1.81
SNX3O60493 HMGB1P49-201ENST00000418882 569 ntBASIC3.72□□□□□ -1.81
SNX3O60493 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
SNX3O60493 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.72□□□□□ -1.81
SNX3O60493 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.72□□□□□ -1.81
SNX3O60493 AC005517.2-201ENST00000424673 553 ntBASIC3.72□□□□□ -1.81
SNX3O60493 RWDD4P2-201ENST00000426392 563 ntBASIC3.72□□□□□ -1.81
SNX3O60493 AL035410.1-201ENST00000427409 427 ntBASIC3.72□□□□□ -1.81
SNX3O60493 RPL23AP1-201ENST00000428990 471 ntBASIC3.72□□□□□ -1.81
SNX3O60493 RPS29P17-201ENST00000430795 166 ntBASIC3.72□□□□□ -1.81
SNX3O60493 AL050321.1-201ENST00000432363 400 ntBASIC3.72□□□□□ -1.81
SNX3O60493 RPS3AP54-201ENST00000435535 734 ntBASIC3.72□□□□□ -1.81
SNX3O60493 MTCO2P20-201ENST00000437339 673 ntBASIC3.72□□□□□ -1.81
SNX3O60493 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
SNX3O60493 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.72□□□□□ -1.81
SNX3O60493 AL590399.6-201ENST00000446396 307 ntBASIC3.72□□□□□ -1.81
SNX3O60493 PPIAP3-201ENST00000450588 505 ntBASIC3.72□□□□□ -1.81
SNX3O60493 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.72□□□□□ -1.81
SNX3O60493 RPL12P26-201ENST00000452430 487 ntBASIC3.72□□□□□ -1.81
SNX3O60493 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.72□□□□□ -1.81
SNX3O60493 AC092757.1-201ENST00000467293 467 ntBASIC3.72□□□□□ -1.81
SNX3O60493 RPS3AP6-201ENST00000484430 795 ntBASIC3.72□□□□□ -1.81
SNX3O60493 AL132838.2-201ENST00000492041 314 ntBASIC3.72□□□□□ -1.81
SNX3O60493 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.72□□□□□ -1.81
SNX3O60493 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.72□□□□□ -1.81
SNX3O60493 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.72□□□□□ -1.81
SNX3O60493 AC079395.1-201ENST00000510981 262 ntBASIC3.72□□□□□ -1.81
SNX3O60493 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.72□□□□□ -1.81
SNX3O60493 FABP5P12-201ENST00000515543 389 ntBASIC3.72□□□□□ -1.81
SNX3O60493 IGHV3-32-201ENST00000519182 355 ntBASIC3.72□□□□□ -1.81
SNX3O60493 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.72□□□□□ -1.81
SNX3O60493 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.72□□□□□ -1.81
SNX3O60493 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SNX3O60493 AC125611.1-201ENST00000549563 229 ntBASIC3.72□□□□□ -1.81
SNX3O60493 NBEAP1-201ENST00000554452 979 ntBASIC3.72□□□□□ -1.81
SNX3O60493 HIGD1AP17-201ENST00000554576 276 ntBASIC3.72□□□□□ -1.81
SNX3O60493 AC007424.1-203ENST00000554613 687 ntBASIC3.72□□□□□ -1.81
SNX3O60493 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.72□□□□□ -1.81
SNX3O60493 AL158211.1-201ENST00000566763 763 ntBASIC3.72□□□□□ -1.81
SNX3O60493 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.72□□□□□ -1.81
SNX3O60493 RPL12P25-202ENST00000598100 674 ntBASIC3.72□□□□□ -1.81
SNX3O60493 AC022022.2-201ENST00000602989 360 ntBASIC3.72□□□□□ -1.81
SNX3O60493 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.72□□□□□ -1.81
SNX3O60493 AC116651.1-201ENST00000609724 556 ntBASIC3.72□□□□□ -1.81
SNX3O60493 AC079395.3-201ENST00000615161 484 ntBASIC3.72□□□□□ -1.81
SNX3O60493 AC231759.1-201ENST00000616455 597 ntBASIC3.72□□□□□ -1.81
SNX3O60493 AC092628.2-201ENST00000622492 339 ntBASIC3.72□□□□□ -1.81
SNX3O60493 AL355480.1-201ENST00000629041 99 ntBASIC3.72□□□□□ -1.81
SNX3O60493 AC116618.1-201ENST00000634617 774 ntBASIC3.72□□□□□ -1.81
SNX3O60493 AC006927.4-201ENST00000639187 543 ntBASIC3.72□□□□□ -1.81
SNX3O60493 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SNX3O60493 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SNX3O60493 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
SNX3O60493 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SNX3O60493 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SNX3O60493 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
SNX3O60493 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
SNX3O60493 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.71□□□□□ -1.82
SNX3O60493 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms