Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.6□□□□□ -1.67
PROM1O43490 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
PROM1O43490 LARP1BP2-201ENST00000486594 519 ntBASIC4.6□□□□□ -1.67
PROM1O43490 RN7SL558P-201ENST00000497468 299 ntBASIC4.6□□□□□ -1.67
PROM1O43490 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.6□□□□□ -1.67
PROM1O43490 GAPDHP56-201ENST00000506031 988 ntBASIC4.6□□□□□ -1.67
PROM1O43490 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.6□□□□□ -1.67
PROM1O43490 AC022483.1-201ENST00000514020 567 ntBASIC4.6□□□□□ -1.67
PROM1O43490 RAB9BP1-201ENST00000519581 626 ntBASIC4.6□□□□□ -1.67
PROM1O43490 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.6□□□□□ -1.67
PROM1O43490 MTND4LP18-201ENST00000526864 291 ntBASIC4.6□□□□□ -1.67
PROM1O43490 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.6□□□□□ -1.67
PROM1O43490 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.6□□□□□ -1.67
PROM1O43490 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.6□□□□□ -1.67
PROM1O43490 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.6□□□□□ -1.67
PROM1O43490 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.6□□□□□ -1.67
PROM1O43490 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.6□□□□□ -1.67
PROM1O43490 AL161713.1-201ENST00000555538 145 ntBASIC4.6□□□□□ -1.67
PROM1O43490 AL049839.1-201ENST00000556151 657 ntBASIC4.6□□□□□ -1.67
PROM1O43490 MIR3913-1-201ENST00000577744 102 ntBASIC4.6□□□□□ -1.67
PROM1O43490 SNORA59B-202ENST00000578183 701 ntBASIC4.6□□□□□ -1.67
PROM1O43490 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.6□□□□□ -1.67
PROM1O43490 AC017100.2-201ENST00000584628 355 ntBASIC4.6□□□□□ -1.67
PROM1O43490 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.6□□□□□ -1.67
PROM1O43490 AC020910.3-201ENST00000603701 874 ntBASIC4.6□□□□□ -1.67
PROM1O43490 BNIP3P11-201ENST00000603878 563 ntBASIC4.6□□□□□ -1.67
PROM1O43490 AC007497.1-201ENST00000610421 561 ntBASIC4.6□□□□□ -1.67
PROM1O43490 AL356321.1-201ENST00000621360 228 ntBASIC4.6□□□□□ -1.67
PROM1O43490 AP000346.3-201ENST00000622821 210 ntBASIC4.6□□□□□ -1.67
PROM1O43490 MIR7641-1-201ENST00000627518 61 ntBASIC4.6□□□□□ -1.67
PROM1O43490 GDI2P1-201ENST00000429312 1336 ntBASIC4.6□□□□□ -1.67
PROM1O43490 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
PROM1O43490 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.6□□□□□ -1.67
PROM1O43490 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.6□□□□□ -1.67
PROM1O43490 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.6□□□□□ -1.67
PROM1O43490 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.59□□□□□ -1.67
PROM1O43490 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.59□□□□□ -1.67
PROM1O43490 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.59□□□□□ -1.67
PROM1O43490 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
PROM1O43490 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PROM1O43490 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
PROM1O43490 OR52B1P-201ENST00000316506 909 ntBASIC4.59□□□□□ -1.67
PROM1O43490 RNU6-251P-201ENST00000363235 104 ntBASIC4.59□□□□□ -1.67
PROM1O43490 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.59□□□□□ -1.67
PROM1O43490 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PROM1O43490 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
PROM1O43490 MIR181A1-201ENST00000385026 110 ntBASIC4.59□□□□□ -1.67
PROM1O43490 AL121972.1-201ENST00000402023 252 ntBASIC4.59□□□□□ -1.67
PROM1O43490 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.59□□□□□ -1.67
PROM1O43490 RNU2-65P-201ENST00000410162 185 ntBASIC4.59□□□□□ -1.67
PROM1O43490 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.59□□□□□ -1.67
PROM1O43490 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.59□□□□□ -1.67
PROM1O43490 GLRXP1-201ENST00000423261 334 ntBASIC4.59□□□□□ -1.67
PROM1O43490 AC233728.2-201ENST00000425348 757 ntBASIC4.59□□□□□ -1.67
PROM1O43490 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PROM1O43490 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.59□□□□□ -1.67
PROM1O43490 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.59□□□□□ -1.67
PROM1O43490 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.59□□□□□ -1.67
PROM1O43490 VN1R34P-201ENST00000447387 883 ntBASIC4.59□□□□□ -1.67
PROM1O43490 SLC25A18P1-201ENST00000449385 454 ntBASIC4.59□□□□□ -1.67
PROM1O43490 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.59□□□□□ -1.67
PROM1O43490 TRGVB-201ENST00000453257 471 ntBASIC4.59□□□□□ -1.67
PROM1O43490 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.59□□□□□ -1.67
PROM1O43490 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.59□□□□□ -1.67
PROM1O43490 AC092757.1-201ENST00000467293 467 ntBASIC4.59□□□□□ -1.67
PROM1O43490 AL121769.1-201ENST00000469473 401 ntBASIC4.59□□□□□ -1.67
PROM1O43490 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.59□□□□□ -1.67
PROM1O43490 RPL30P11-201ENST00000495304 339 ntBASIC4.59□□□□□ -1.67
PROM1O43490 FTH1P24-201ENST00000503502 462 ntBASIC4.59□□□□□ -1.67
PROM1O43490 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.59□□□□□ -1.67
PROM1O43490 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PROM1O43490 AC021678.1-201ENST00000505195 936 ntBASIC4.59□□□□□ -1.67
PROM1O43490 KRT19P6-201ENST00000510983 209 ntBASIC4.59□□□□□ -1.67
PROM1O43490 RN7SKP82-201ENST00000516786 223 ntBASIC4.59□□□□□ -1.67
PROM1O43490 RNU6-709P-201ENST00000517257 104 ntBASIC4.59□□□□□ -1.67
PROM1O43490 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
PROM1O43490 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.59□□□□□ -1.67
PROM1O43490 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.59□□□□□ -1.67
PROM1O43490 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.59□□□□□ -1.67
PROM1O43490 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.59□□□□□ -1.67
PROM1O43490 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PROM1O43490 AC124947.2-202ENST00000552735 133 ntBASIC4.59□□□□□ -1.67
PROM1O43490 EDDM3DP-201ENST00000554692 434 ntBASIC4.59□□□□□ -1.67
PROM1O43490 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.59□□□□□ -1.67
PROM1O43490 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.59□□□□□ -1.67
PROM1O43490 BGLT3-201ENST00000564523 994 ntBASIC4.59□□□□□ -1.67
PROM1O43490 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.59□□□□□ -1.67
PROM1O43490 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.59□□□□□ -1.67
PROM1O43490 CYCSP40-201ENST00000575927 294 ntBASIC4.59□□□□□ -1.67
PROM1O43490 MIR5697-201ENST00000578045 78 ntBASIC4.59□□□□□ -1.67
PROM1O43490 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.59□□□□□ -1.67
PROM1O43490 AC073544.1-201ENST00000600110 1595 ntBASIC4.59□□□□□ -1.67
PROM1O43490 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.59□□□□□ -1.67
PROM1O43490 AL121932.1-201ENST00000605542 214 ntBASIC4.59□□□□□ -1.67
PROM1O43490 LARP7P1-201ENST00000605576 316 ntBASIC4.59□□□□□ -1.67
PROM1O43490 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.59□□□□□ -1.67
PROM1O43490 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PROM1O43490 AC007014.2-201ENST00000615581 479 ntBASIC4.59□□□□□ -1.67
PROM1O43490 AL158209.2-201ENST00000619266 216 ntBASIC4.59□□□□□ -1.67
PROM1O43490 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms