Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 RN7SKP177-201ENST00000410567 355 ntBASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 BTF3P8-201ENST00000414577 526 ntBASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 DBIP2-201ENST00000419076 262 ntBASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 BX842559.1-201ENST00000419615 532 ntBASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 C1DP1-201ENST00000426049 402 ntBASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 USP12PY-201ENST00000427677 1064 ntBASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 ATP5HP2-201ENST00000433885 485 ntBASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 NDUFB1P1-201ENST00000435191 180 ntBASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 AC105402.2-201ENST00000438503 358 ntBASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 AC004854.1-201ENST00000440356 349 ntBASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 AC104978.1-201ENST00000449387 391 ntBASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 AC233982.1-201ENST00000451247 436 ntBASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 WBP1LP4-201ENST00000505043 344 ntBASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 AC004069.2-201ENST00000505438 1114 ntBASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 SNORA70.14-201ENST00000516205 110 ntBASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 snoZ278.1-201ENST00000517059 112 ntBASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 AC021451.1-201ENST00000523498 1129 ntBASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 AC007458.1-201ENST00000542812 373 ntBASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 BPTFP1-201ENST00000579209 492 ntBASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 Z82195.1-201ENST00000604558 398 ntBASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 AC096577.2-201ENST00000611455 153 ntBASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 MIR7975-201ENST00000619350 68 ntBASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 MTND4P10-201ENST00000446199 1363 ntBASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.7□□□□□ -1.82
NEDD8-MDP1E9PL57 PRO1804-201ENST00000623780 2050 ntBASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 MTCO1P14-201ENST00000441695 1559 ntBASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 RNU6-1293P-201ENST00000384077 107 ntBASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 SFR1P1-201ENST00000403720 688 ntBASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 RNU2-21P-201ENST00000410368 188 ntBASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 AP000907.1-201ENST00000428428 510 ntBASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 MTCO1P53-201ENST00000441633 699 ntBASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 MTCYBP42-201ENST00000444653 1130 ntBASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 AC090071.1-201ENST00000507713 644 ntBASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 AC118282.2-201ENST00000508739 374 ntBASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 RN7SKP209-201ENST00000516888 304 ntBASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 MTCO3P15-201ENST00000526563 574 ntBASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 OR4C2P-201ENST00000530855 1064 ntBASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 AC005412.1-201ENST00000580812 1049 ntBASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 MIR7851-201ENST00000610611 160 ntBASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 RNU6-156P-201ENST00000621869 107 ntBASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 AC000123.2-201ENST00000623124 461 ntBASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 AL732618.1-201ENST00000623251 301 ntBASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 AC009452.1-201ENST00000640823 606 ntBASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NEDD8-MDP1E9PL57 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 SAGE2P-201ENST00000420011 2126 ntBASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 ANKRD36P1-201ENST00000344424 659 ntBASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 RNVU1-14-201ENST00000384770 164 ntBASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 RPS7P15-201ENST00000415804 584 ntBASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 MTND4P3-201ENST00000417829 541 ntBASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 AL358794.1-201ENST00000445689 381 ntBASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 RPL23AP15-201ENST00000450202 459 ntBASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 DNAJC19P1-201ENST00000455312 319 ntBASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.68□□□□□ -1.82
NEDD8-MDP1E9PL57 AC025518.1-201ENST00000479856 347 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms