Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 SCARNA10-201ENST00000459255 330 ntBASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 RN7SL385P-201ENST00000468873 276 ntBASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 AC126182.1-201ENST00000478134 357 ntBASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 AC026979.1-201ENST00000492525 396 ntBASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 RPL7P24-201ENST00000493052 752 ntBASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 AC106872.3-201ENST00000495104 446 ntBASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 AC018797.3-201ENST00000513388 1241 ntBASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 AC091178.1-203ENST00000584586 279 ntBASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 AC126118.1-201ENST00000607744 628 ntBASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 AC097468.3-201ENST00000607956 456 ntBASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 AC116447.1-201ENST00000613153 453 ntBASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 CRYM-AS1-204ENST00000637983 556 ntBASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PTPDC1A2A3K4 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
PTPDC1A2A3K4 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 MAPK10-303ENST00000641324 3959 ntBASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 ANKRD36BP1-202ENST00000604892 1417 ntBASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 EOGT-210ENST00000615922 1931 ntBASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 AC010300.1-201ENST00000600671 5134 ntBASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 SNORA40.3-201ENST00000390964 122 ntBASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 MIR320C1-201ENST00000408566 88 ntBASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 RN7SKP167-201ENST00000411047 285 ntBASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 EIF1P1-201ENST00000421436 341 ntBASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 RPL36P19-201ENST00000430744 301 ntBASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 AL033528.1-201ENST00000453780 140 ntBASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 RNU7-136P-201ENST00000458819 69 ntBASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 AC017015.1-201ENST00000477387 286 ntBASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 TMED11P-201ENST00000479478 690 ntBASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 LARP1BP2-201ENST00000486594 519 ntBASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 FAM172BP-201ENST00000487497 1089 ntBASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 AF131216.2-201ENST00000512316 564 ntBASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 RNU6-1178P-201ENST00000516674 107 ntBASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 MTCYBP41-201ENST00000528913 1123 ntBASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 ZNF705CP-201ENST00000530515 889 ntBASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 AC013828.2-201ENST00000532487 235 ntBASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 AC008127.2-201ENST00000549925 1075 ntBASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 LSM6P2-201ENST00000552208 177 ntBASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 NF1P5-201ENST00000588287 448 ntBASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 AC025588.4-201ENST00000615802 908 ntBASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 AL445437.1-201ENST00000623157 3087 ntBASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PTPDC1A2A3K4 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 AP002907.1-201ENST00000606361 1430 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 OR14L1P-202ENST00000641545 3009 ntBASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
PTPDC1A2A3K4 AC021146.4-201ENST00000309229 279 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms