Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 RNY4P24-201ENST00000362735 96 ntBASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 MTCYBP45-201ENST00000435243 565 ntBASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 TDGF1P1-201ENST00000445734 527 ntBASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 AP000542.1-201ENST00000448473 371 ntBASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 AC079168.2-201ENST00000453977 416 ntBASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 HMGB1P25-201ENST00000468402 607 ntBASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 UBTFL6-201ENST00000477929 1024 ntBASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 RN7SL459P-201ENST00000481078 302 ntBASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 AC025164.1-201ENST00000496249 478 ntBASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 AC002456.2-201ENST00000509356 380 ntBASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 AC023161.2-201ENST00000551218 780 ntBASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 GTF2IP22-201ENST00000554443 182 ntBASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 AC006378.2-201ENST00000623178 2476 ntBASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.23□□□□□ -1.57
COL4A3BPQ9Y5P4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 Z98755.1-201ENST00000407015 1384 ntBASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 RNU6-1249P-201ENST00000363237 111 ntBASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 RNU6-97P-201ENST00000363387 104 ntBASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 RNU6-359P-201ENST00000365466 108 ntBASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 U8.14-201ENST00000390843 143 ntBASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 AC127526.1-201ENST00000417526 366 ntBASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 RPL37P21-201ENST00000435890 276 ntBASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 MTND4P32-201ENST00000437189 1237 ntBASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 LARP1BP3-201ENST00000437229 869 ntBASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 RSU1P2-202ENST00000437884 485 ntBASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 RPS26P2-201ENST00000440331 348 ntBASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 COX6CP2-201ENST00000444980 225 ntBASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 HMGB1P36-201ENST00000487709 576 ntBASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 AC117532.1-201ENST00000514638 323 ntBASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 RNU6-714P-201ENST00000516963 103 ntBASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 RN7SL652P-201ENST00000577769 300 ntBASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 AC083760.1-201ENST00000589621 670 ntBASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 AC008745.1-201ENST00000604064 271 ntBASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 AL022161.1-201ENST00000604390 213 ntBASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 AC128687.1-201ENST00000605304 619 ntBASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 AL031775.1-201ENST00000607014 887 ntBASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 PABPC1P9-201ENST00000426076 1612 ntBASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
COL4A3BPQ9Y5P4 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
COL4A3BPQ9Y5P4 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
COL4A3BPQ9Y5P4 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.57
COL4A3BPQ9Y5P4 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 NOL8P1-201ENST00000508336 3529 ntBASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 AC126323.6-202ENST00000568092 3511 ntBASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 SNORA70F-201ENST00000384142 135 ntBASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 RNA5SP332-201ENST00000391063 115 ntBASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 RN7SKP267-201ENST00000410381 285 ntBASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 FAR2P2-201ENST00000413041 594 ntBASIC5.21□□□□□ -1.58
COL4A3BPQ9Y5P4 FAR2P4-202ENST00000425399 584 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 163.2 ms