Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC015871.2-201ENST00000603605 948 ntBASIC5.33□□□□□ -1.56
CTDP1Q9Y5B0 AC233280.2-201ENST00000603917 1070 ntBASIC5.33□□□□□ -1.56
CTDP1Q9Y5B0 AL390816.3-201ENST00000604527 1066 ntBASIC5.33□□□□□ -1.56
CTDP1Q9Y5B0 AC115621.1-201ENST00000604653 858 ntBASIC5.33□□□□□ -1.56
CTDP1Q9Y5B0 AF250324.2-201ENST00000608299 610 ntBASIC5.33□□□□□ -1.56
CTDP1Q9Y5B0 AC006566.1-201ENST00000608943 513 ntBASIC5.33□□□□□ -1.56
CTDP1Q9Y5B0 AC055764.2-201ENST00000610089 670 ntBASIC5.33□□□□□ -1.56
CTDP1Q9Y5B0 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CTDP1Q9Y5B0 U4.5-201ENST00000617137 123 ntBASIC5.33□□□□□ -1.56
CTDP1Q9Y5B0 AC023509.5-201ENST00000617434 807 ntBASIC5.33□□□□□ -1.56
CTDP1Q9Y5B0 AP000843.1-201ENST00000624880 701 ntBASIC5.33□□□□□ -1.56
CTDP1Q9Y5B0 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.33□□□□□ -1.56
CTDP1Q9Y5B0 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.33□□□□□ -1.56
CTDP1Q9Y5B0 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CTDP1Q9Y5B0 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CTDP1Q9Y5B0 ADAM5-202ENST00000399789 1942 ntBASIC5.33□□□□□ -1.56
CTDP1Q9Y5B0 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 TEX21P-201ENST00000447107 1476 ntBASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 AC107982.1-201ENST00000507171 1300 ntBASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 RNU6-501P-201ENST00000364072 100 ntBASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 RNA5SP88-201ENST00000365560 109 ntBASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 BTF3P7-201ENST00000407097 488 ntBASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 RNU4-25P-201ENST00000410569 230 ntBASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 AC068533.2-201ENST00000411872 306 ntBASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 AC092647.1-201ENST00000420654 287 ntBASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 RPL7AP25-201ENST00000423357 805 ntBASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 AL732292.1-201ENST00000426692 226 ntBASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 UBE2V1P8-201ENST00000437166 265 ntBASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 RPL23AP93-201ENST00000440847 484 ntBASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 AC011276.1-201ENST00000469688 323 ntBASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 AC090686.1-201ENST00000481577 749 ntBASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 RNA5SP135-201ENST00000517019 125 ntBASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 DEFB109D-201ENST00000529497 240 ntBASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 RPS3AP4-201ENST00000555161 764 ntBASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 AC020914.6-201ENST00000594327 272 ntBASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 AP004247.3-201ENST00000608682 624 ntBASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 OR6R2P-201ENST00000609216 300 ntBASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 AL023881.1-201ENST00000621088 301 ntBASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 AL133243.3-201ENST00000617415 3004 ntBASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CTDP1Q9Y5B0 AC135352.1-201ENST00000506173 1418 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 AC087190.4-201ENST00000574616 8334 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 AC025125.1-201ENST00000624743 1922 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 AC073544.1-201ENST00000600110 1595 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 AC021146.4-201ENST00000309229 279 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 Y_RNA.88-201ENST00000363029 99 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 AC007066.1-201ENST00000392902 381 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 SDHCP2-201ENST00000398565 501 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 U3.35-201ENST00000408405 208 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 AL592293.2-201ENST00000422292 996 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 RPL7P4-203ENST00000430239 730 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 AL513175.1-201ENST00000431492 780 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 UBE2FP3-201ENST00000436366 524 ntBASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.31□□□□□ -1.56
CTDP1Q9Y5B0 EEF1E1P1-201ENST00000446998 430 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms