Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AP002770.2-201ENST00000543613 532 ntBASIC7.25□□□□□ -1.25
PDZRN3Q9UPQ7 IMMP1LP2-201ENST00000552954 492 ntBASIC7.25□□□□□ -1.25
PDZRN3Q9UPQ7 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC7.25□□□□□ -1.25
PDZRN3Q9UPQ7 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC7.25□□□□□ -1.25
PDZRN3Q9UPQ7 HMGB1P6-201ENST00000569046 646 ntBASIC7.25□□□□□ -1.25
PDZRN3Q9UPQ7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC7.25□□□□□ -1.25
PDZRN3Q9UPQ7 AC069061.3-201ENST00000582254 823 ntBASIC7.25□□□□□ -1.25
PDZRN3Q9UPQ7 MIR544B-201ENST00000582372 78 ntBASIC7.25□□□□□ -1.25
PDZRN3Q9UPQ7 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC7.25□□□□□ -1.25
PDZRN3Q9UPQ7 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC7.25□□□□□ -1.25
PDZRN3Q9UPQ7 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC7.25□□□□□ -1.25
PDZRN3Q9UPQ7 BNIP3P4-201ENST00000604946 565 ntBASIC7.25□□□□□ -1.25
PDZRN3Q9UPQ7 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC7.25□□□□□ -1.25
PDZRN3Q9UPQ7 DDX18P6-201ENST00000450119 1997 ntBASIC7.25□□□□□ -1.25
PDZRN3Q9UPQ7 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC7.25□□□□□ -1.25
PDZRN3Q9UPQ7 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
PDZRN3Q9UPQ7 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PDZRN3Q9UPQ7 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
PDZRN3Q9UPQ7 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC7.25□□□□□ -1.25
PDZRN3Q9UPQ7 MTCO1P14-201ENST00000441695 1559 ntBASIC7.25□□□□□ -1.25
PDZRN3Q9UPQ7 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 ENSAP3-201ENST00000312710 333 ntBASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 RPL32P3-201ENST00000359025 275 ntBASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 MIR514A2-201ENST00000385131 88 ntBASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 MIR514A3-201ENST00000385132 88 ntBASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 RNU11-201ENST00000387069 134 ntBASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 SKP1P3-201ENST00000429280 487 ntBASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 BTF3P5-201ENST00000457252 467 ntBASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 UBA52P7-201ENST00000486088 380 ntBASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 AC004453.1-201ENST00000487895 408 ntBASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 TMEM248P1-201ENST00000510579 951 ntBASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 LIAS-206ENST00000513731 826 ntTSL 5 BASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 RN7SKP24-201ENST00000515888 284 ntBASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 RNU6-1088P-201ENST00000516850 104 ntBASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 IGLV3-30-201ENST00000524362 298 ntBASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 AC010547.7-201ENST00000570323 333 ntBASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 AL360012.1-201ENST00000602813 131 ntBASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 MTND4LP5-201ENST00000605152 292 ntBASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 RMST_5.1-201ENST00000618704 126 ntBASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 AC007546.1-201ENST00000619452 559 ntBASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC7.24□□□□□ -1.25
PDZRN3Q9UPQ7 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 AL034546.1-201ENST00000623740 3693 ntBASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 AC093909.5-201ENST00000621839 1799 ntBASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 SRRM1P3-201ENST00000426911 2678 ntBASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 RNU6-1290P-201ENST00000362957 109 ntBASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 RNU6-450P-201ENST00000364654 107 ntBASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 RNU6-1300P-201ENST00000391046 108 ntBASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 AL589647.1-201ENST00000402485 466 ntBASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 AC023141.8-201ENST00000442554 208 ntBASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 OSTCP8-201ENST00000445117 448 ntBASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 AC092647.2-201ENST00000452998 253 ntBASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 HMGB1P15-201ENST00000453854 435 ntBASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 RANP1-206ENST00000455094 651 ntBASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 RN7SL570P-201ENST00000484405 292 ntBASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 NDUFB5P1-201ENST00000508134 564 ntBASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 AC074255.1-201ENST00000511259 501 ntBASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 Y_RNA.673-201ENST00000516306 88 ntBASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 IGHVIII-76-1-201ENST00000523776 286 ntBASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 AC015712.7-201ENST00000615211 635 ntBASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 MFSD4BP1-201ENST00000513330 1552 ntBASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC7.23□□□□□ -1.25
PDZRN3Q9UPQ7 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
PDZRN3Q9UPQ7 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms