Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AL357559.1-201ENST00000622228 274 ntBASIC3.42□□□□□ -1.86
NPIPA1Q9UND3 MTCO1P12-201ENST00000414273 1543 ntBASIC3.42□□□□□ -1.86
NPIPA1Q9UND3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NPIPA1Q9UND3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NPIPA1Q9UND3 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NPIPA1Q9UND3 SGO1P1-201ENST00000603525 1447 ntBASIC3.42□□□□□ -1.86
NPIPA1Q9UND3 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NPIPA1Q9UND3 AC006504.1-201ENST00000562493 3666 ntBASIC3.42□□□□□ -1.86
NPIPA1Q9UND3 AL359893.1-201ENST00000447628 1580 ntBASIC3.42□□□□□ -1.86
NPIPA1Q9UND3 AL021368.2-201ENST00000606125 5352 ntBASIC3.42□□□□□ -1.86
NPIPA1Q9UND3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 RNA5SP51-201ENST00000364750 119 ntBASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 RNU6-207P-201ENST00000384137 107 ntBASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 MIR218-2-201ENST00000385006 110 ntBASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 MIR16-1-201ENST00000385271 89 ntBASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 HSPE1P8-201ENST00000406997 288 ntBASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 AC009237.2-201ENST00000421358 284 ntBASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 AC096632.1-201ENST00000427395 310 ntBASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 AL050341.1-201ENST00000447743 313 ntBASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 NPM1P49-201ENST00000448027 714 ntBASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 RPS3AP46-201ENST00000448352 682 ntBASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 HMGN3P1-201ENST00000453847 193 ntBASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 AC010307.1-201ENST00000467206 836 ntBASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 AC084198.1-201ENST00000477747 402 ntBASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 AC108941.1-201ENST00000502853 530 ntBASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 AC104057.1-201ENST00000515547 497 ntBASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 AP001207.1-201ENST00000524051 481 ntBASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 AC092747.2-201ENST00000545069 983 ntBASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 AC092470.1-201ENST00000546187 132 ntBASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 CR383656.14-201ENST00000551951 406 ntBASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 RN7SL339P-201ENST00000580597 296 ntBASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 MIR3922-201ENST00000585192 84 ntBASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 AL159169.3-201ENST00000608871 561 ntBASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 AC015967.1-201ENST00000619893 476 ntBASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 BX649567.1-201ENST00000642071 1134 ntBASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NPIPA1Q9UND3 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
NPIPA1Q9UND3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
NPIPA1Q9UND3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 RNA5SP322-201ENST00000363617 119 ntBASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 RNU6-468P-201ENST00000384003 109 ntBASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 MIR34B-201ENST00000385076 84 ntBASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 MT-TC-201ENST00000387405 66 ntBASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 HMGN2P8-201ENST00000391458 268 ntBASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 MTCYBP24-201ENST00000420387 1106 ntBASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 HIGD1AP12-201ENST00000427832 281 ntBASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 RPL23AP83-201ENST00000434984 473 ntBASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 AC000041.1-201ENST00000439655 175 ntBASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 Z99714.1-201ENST00000450463 807 ntBASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 NF1P3-201ENST00000457709 450 ntBASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 UBDP1-202ENST00000457888 382 ntBASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 RPS17P11-201ENST00000474297 293 ntBASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 RNA5SP208-201ENST00000516156 78 ntBASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 RN7SKP209-201ENST00000516888 304 ntBASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.4□□□□□ -1.87
NPIPA1Q9UND3 OR8K4P-201ENST00000534608 872 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms