Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 OR5G4P-201ENST00000525251 760 ntBASIC2.65□□□□□ -1.98
KIAA1549Q9HCM3 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.65□□□□□ -1.98
KIAA1549Q9HCM3 CYCSP39-201ENST00000565821 309 ntBASIC2.65□□□□□ -1.98
KIAA1549Q9HCM3 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.65□□□□□ -1.98
KIAA1549Q9HCM3 AC093831.2-201ENST00000624393 3427 ntBASIC2.65□□□□□ -1.98
KIAA1549Q9HCM3 OR5BR1P-201ENST00000524992 1330 ntBASIC2.65□□□□□ -1.98
KIAA1549Q9HCM3 AC017002.4-201ENST00000604721 1525 ntBASIC2.65□□□□□ -1.99
KIAA1549Q9HCM3 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.65□□□□□ -1.99
KIAA1549Q9HCM3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
KIAA1549Q9HCM3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.99
KIAA1549Q9HCM3 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC2.65□□□□□ -1.99
KIAA1549Q9HCM3 RN7SKP58-201ENST00000411010 305 ntBASIC2.65□□□□□ -1.99
KIAA1549Q9HCM3 HMGB3P23-201ENST00000414981 585 ntBASIC2.65□□□□□ -1.99
KIAA1549Q9HCM3 AC012498.1-201ENST00000424037 437 ntBASIC2.65□□□□□ -1.99
KIAA1549Q9HCM3 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.65□□□□□ -1.99
KIAA1549Q9HCM3 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.65□□□□□ -1.99
KIAA1549Q9HCM3 AC140076.1-201ENST00000449897 361 ntBASIC2.65□□□□□ -1.99
KIAA1549Q9HCM3 RPS27P29-201ENST00000463110 252 ntBASIC2.65□□□□□ -1.99
KIAA1549Q9HCM3 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
KIAA1549Q9HCM3 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC2.65□□□□□ -1.99
KIAA1549Q9HCM3 IGHV3-76-201ENST00000522465 295 ntBASIC2.65□□□□□ -1.99
KIAA1549Q9HCM3 COX6CP8-201ENST00000522620 226 ntBASIC2.65□□□□□ -1.99
KIAA1549Q9HCM3 SMARCE1P4-201ENST00000523647 241 ntBASIC2.65□□□□□ -1.99
KIAA1549Q9HCM3 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC2.65□□□□□ -1.99
KIAA1549Q9HCM3 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.65□□□□□ -1.99
KIAA1549Q9HCM3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.65□□□□□ -1.99
KIAA1549Q9HCM3 MTCO3P22-201ENST00000603219 784 ntBASIC2.65□□□□□ -1.99
KIAA1549Q9HCM3 ATP1B3P1-201ENST00000605365 821 ntBASIC2.65□□□□□ -1.99
KIAA1549Q9HCM3 AC004943.3-201ENST00000624116 600 ntBASIC2.65□□□□□ -1.99
KIAA1549Q9HCM3 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.65□□□□□ -1.99
KIAA1549Q9HCM3 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
KIAA1549Q9HCM3 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
KIAA1549Q9HCM3 AC116096.1-201ENST00000566804 2314 ntBASIC2.64□□□□□ -1.99
KIAA1549Q9HCM3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
KIAA1549Q9HCM3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KIAA1549Q9HCM3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KIAA1549Q9HCM3 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.64□□□□□ -1.99
KIAA1549Q9HCM3 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.64□□□□□ -1.99
KIAA1549Q9HCM3 AC073464.3-201ENST00000422564 712 ntBASIC2.64□□□□□ -1.99
KIAA1549Q9HCM3 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC2.64□□□□□ -1.99
KIAA1549Q9HCM3 SETP5-201ENST00000437270 562 ntBASIC2.64□□□□□ -1.99
KIAA1549Q9HCM3 HMGB1P5-202ENST00000451497 985 ntBASIC2.64□□□□□ -1.99
KIAA1549Q9HCM3 RPL21P8-201ENST00000465083 535 ntBASIC2.64□□□□□ -1.99
KIAA1549Q9HCM3 ST13P14-201ENST00000474095 734 ntBASIC2.64□□□□□ -1.99
KIAA1549Q9HCM3 RN7SKP60-201ENST00000516985 239 ntBASIC2.64□□□□□ -1.99
KIAA1549Q9HCM3 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC2.64□□□□□ -1.99
KIAA1549Q9HCM3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.64□□□□□ -1.99
KIAA1549Q9HCM3 AC034105.3-201ENST00000565294 442 ntBASIC2.64□□□□□ -1.99
KIAA1549Q9HCM3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
KIAA1549Q9HCM3 AL079305.1-201ENST00000623159 3008 ntBASIC2.64□□□□□ -1.99
KIAA1549Q9HCM3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
KIAA1549Q9HCM3 RNU6-7-201ENST00000364784 107 ntBASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 RNU6-8-201ENST00000365467 107 ntBASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 MIR124-3-201ENST00000384866 87 ntBASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 RPL5P18-201ENST00000406671 891 ntBASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 SNRPGP5-201ENST00000456003 220 ntBASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 AP000926.1-201ENST00000479573 241 ntBASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 HMGB1P6-201ENST00000569046 646 ntBASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 MIR5047-201ENST00000579212 100 ntBASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 VN1R81P-201ENST00000602085 372 ntBASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 AC007566.2-201ENST00000603642 413 ntBASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 AC007318.2-201ENST00000620999 243 ntBASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 PLCE1P1-201ENST00000622094 305 ntBASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 AC119674.1-212ENST00000641155 993 ntBASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 MTND5P19-201ENST00000424872 1794 ntBASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 AC114546.3-201ENST00000623582 1734 ntBASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 RNU6-697P-201ENST00000363348 107 ntBASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 RNU6-1331P-201ENST00000363658 106 ntBASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 AC007390.1-201ENST00000415722 356 ntBASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 NUP35P1-201ENST00000422734 947 ntBASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 B3GNT2P1-201ENST00000434960 952 ntBASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 RPS29P6-201ENST00000438196 145 ntBASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 UQCRHP3-201ENST00000451503 251 ntBASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 AC010683.1-201ENST00000473673 378 ntBASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 NPM1P52-201ENST00000518264 846 ntBASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 AC006111.3-201ENST00000622137 383 ntBASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
KIAA1549Q9HCM3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
KIAA1549Q9HCM3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.62□□□□□ -1.99
KIAA1549Q9HCM3 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
KIAA1549Q9HCM3 RNA5SP184-201ENST00000411071 108 ntBASIC2.62□□□□□ -1.99
KIAA1549Q9HCM3 RPL7P53-201ENST00000421245 739 ntBASIC2.62□□□□□ -1.99
KIAA1549Q9HCM3 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms