Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 AL365503.1-201ENST00000605247 905 ntBASIC5.58□□□□□ -1.52
DDX11Q96FC9 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.58□□□□□ -1.52
DDX11Q96FC9 SNORD91B-202ENST00000608459 222 ntBASIC5.58□□□□□ -1.52
DDX11Q96FC9 AL353726.1-201ENST00000614041 1000 ntBASIC5.58□□□□□ -1.52
DDX11Q96FC9 AC138649.3-201ENST00000622154 254 ntBASIC5.58□□□□□ -1.52
DDX11Q96FC9 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.58□□□□□ -1.52
DDX11Q96FC9 MTND1P37-201ENST00000636562 264 ntBASIC5.58□□□□□ -1.52
DDX11Q96FC9 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.58□□□□□ -1.52
DDX11Q96FC9 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
DDX11Q96FC9 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
DDX11Q96FC9 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
DDX11Q96FC9 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
DDX11Q96FC9 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
DDX11Q96FC9 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
DDX11Q96FC9 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.57□□□□□ -1.52
DDX11Q96FC9 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
DDX11Q96FC9 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
DDX11Q96FC9 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
DDX11Q96FC9 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.57□□□□□ -1.52
DDX11Q96FC9 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
DDX11Q96FC9 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
DDX11Q96FC9 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
DDX11Q96FC9 AL590240.1-201ENST00000334118 313 ntBASIC5.57□□□□□ -1.52
DDX11Q96FC9 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
DDX11Q96FC9 RNU1-82P-201ENST00000390851 165 ntBASIC5.57□□□□□ -1.52
DDX11Q96FC9 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.57□□□□□ -1.52
DDX11Q96FC9 RSU1P3-201ENST00000412878 835 ntBASIC5.57□□□□□ -1.52
DDX11Q96FC9 OFD1P18Y-201ENST00000420889 959 ntBASIC5.57□□□□□ -1.52
DDX11Q96FC9 AL139413.1-201ENST00000421309 217 ntBASIC5.57□□□□□ -1.52
DDX11Q96FC9 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.57□□□□□ -1.52
DDX11Q96FC9 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.57□□□□□ -1.52
DDX11Q96FC9 AC244505.5-201ENST00000443639 207 ntBASIC5.57□□□□□ -1.52
DDX11Q96FC9 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
DDX11Q96FC9 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.57□□□□□ -1.52
DDX11Q96FC9 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.57□□□□□ -1.52
DDX11Q96FC9 AC239367.2-201ENST00000447309 705 ntBASIC5.57□□□□□ -1.52
DDX11Q96FC9 PSPHP1-201ENST00000450062 261 ntBASIC5.57□□□□□ -1.52
DDX11Q96FC9 RPL7P31-201ENST00000450192 724 ntBASIC5.57□□□□□ -1.52
DDX11Q96FC9 AL445433.1-201ENST00000457507 257 ntBASIC5.57□□□□□ -1.52
DDX11Q96FC9 RNU6-1218P-201ENST00000458990 108 ntBASIC5.57□□□□□ -1.52
DDX11Q96FC9 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
DDX11Q96FC9 RN7SL385P-201ENST00000468873 276 ntBASIC5.57□□□□□ -1.52
DDX11Q96FC9 AP000852.1-201ENST00000472460 573 ntBASIC5.57□□□□□ -1.52
DDX11Q96FC9 AC022795.1-201ENST00000473808 480 ntBASIC5.57□□□□□ -1.52
DDX11Q96FC9 AL035404.1-201ENST00000497982 568 ntBASIC5.57□□□□□ -1.52
DDX11Q96FC9 AC108078.3-201ENST00000502633 489 ntBASIC5.57□□□□□ -1.52
DDX11Q96FC9 AC011352.3-201ENST00000505162 593 ntBASIC5.57□□□□□ -1.52
DDX11Q96FC9 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.57□□□□□ -1.52
DDX11Q96FC9 AC093824.1-201ENST00000508796 343 ntBASIC5.57□□□□□ -1.52
DDX11Q96FC9 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.57□□□□□ -1.52
DDX11Q96FC9 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC5.57□□□□□ -1.52
DDX11Q96FC9 AC133555.2-201ENST00000550213 292 ntBASIC5.57□□□□□ -1.52
DDX11Q96FC9 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.57□□□□□ -1.52
DDX11Q96FC9 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.57□□□□□ -1.52
DDX11Q96FC9 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.57□□□□□ -1.52
DDX11Q96FC9 AC022726.1-201ENST00000587475 207 ntBASIC5.57□□□□□ -1.52
DDX11Q96FC9 VN1R79P-201ENST00000593540 513 ntBASIC5.57□□□□□ -1.52
DDX11Q96FC9 VN1R84P-201ENST00000593697 235 ntBASIC5.57□□□□□ -1.52
DDX11Q96FC9 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.57□□□□□ -1.52
DDX11Q96FC9 AL390208.1-201ENST00000605885 644 ntBASIC5.57□□□□□ -1.52
DDX11Q96FC9 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.57□□□□□ -1.52
DDX11Q96FC9 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.57□□□□□ -1.52
DDX11Q96FC9 AC010133.1-201ENST00000615809 842 ntBASIC5.57□□□□□ -1.52
DDX11Q96FC9 AC002553.4-201ENST00000616896 331 ntBASIC5.57□□□□□ -1.52
DDX11Q96FC9 AC124864.2-201ENST00000624736 186 ntBASIC5.57□□□□□ -1.52
DDX11Q96FC9 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.57□□□□□ -1.52
DDX11Q96FC9 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
DDX11Q96FC9 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.57□□□□□ -1.52
DDX11Q96FC9 AP002001.2-201ENST00000529025 1469 ntBASIC5.57□□□□□ -1.52
DDX11Q96FC9 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.57□□□□□ -1.52
DDX11Q96FC9 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
DDX11Q96FC9 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
DDX11Q96FC9 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
DDX11Q96FC9 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
DDX11Q96FC9 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
DDX11Q96FC9 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
DDX11Q96FC9 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
DDX11Q96FC9 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
DDX11Q96FC9 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
DDX11Q96FC9 RNU1-83P-201ENST00000363426 164 ntBASIC5.56□□□□□ -1.52
DDX11Q96FC9 RNU5F-7P-201ENST00000363696 115 ntBASIC5.56□□□□□ -1.52
DDX11Q96FC9 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
DDX11Q96FC9 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
DDX11Q96FC9 LINC00993-201ENST00000420453 540 ntBASIC5.56□□□□□ -1.52
DDX11Q96FC9 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC5.56□□□□□ -1.52
DDX11Q96FC9 AC233728.2-201ENST00000425348 757 ntBASIC5.56□□□□□ -1.52
DDX11Q96FC9 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.56□□□□□ -1.52
DDX11Q96FC9 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC5.56□□□□□ -1.52
DDX11Q96FC9 AC016831.4-201ENST00000438302 307 ntBASIC5.56□□□□□ -1.52
DDX11Q96FC9 AC092013.1-201ENST00000438795 332 ntBASIC5.56□□□□□ -1.52
DDX11Q96FC9 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.56□□□□□ -1.52
DDX11Q96FC9 GDI2P2-201ENST00000445131 608 ntBASIC5.56□□□□□ -1.52
DDX11Q96FC9 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.56□□□□□ -1.52
DDX11Q96FC9 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
DDX11Q96FC9 MTND1P11-201ENST00000456661 876 ntBASIC5.56□□□□□ -1.52
DDX11Q96FC9 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.56□□□□□ -1.52
DDX11Q96FC9 AK3P4-201ENST00000504283 583 ntBASIC5.56□□□□□ -1.52
DDX11Q96FC9 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
DDX11Q96FC9 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
DDX11Q96FC9 TRAV15-201ENST00000556680 249 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms