Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RPL7P6-201ENST00000480903 738 ntBASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 SNRPCP2-201ENST00000504370 475 ntBASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 AC107222.1-201ENST00000510899 637 ntBASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 PTP4A1P6-201ENST00000531034 478 ntBASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 AC023442.1-201ENST00000531247 422 ntBASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 APOOP3-201ENST00000536787 586 ntBASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 AC127381.1-201ENST00000555979 939 ntBASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 SS18L2P2-201ENST00000583960 235 ntBASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 BX664608.1-201ENST00000610519 487 ntBASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 AC018926.3-201ENST00000618841 406 ntBASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 AC099494.2-201ENST00000623371 978 ntBASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 AC010149.2-201ENST00000637608 315 ntBASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 ASNSP1-204ENST00000641977 1664 ntBASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.68□□□□□ -1.5
SHKBP1Q8TBC3 AC090017.1-201ENST00000548612 1779 ntBASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 Y_RNA.100-201ENST00000363141 102 ntBASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 Y_RNA.158-201ENST00000363651 101 ntBASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 Y_RNA.301-201ENST00000364990 103 ntBASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 Y_RNA.339-201ENST00000365325 102 ntBASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 RNU6-169P-201ENST00000365336 107 ntBASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 SNORA20.2-201ENST00000383922 131 ntBASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 Y_RNA.557-201ENST00000384680 107 ntBASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 RN7SKP247-201ENST00000411094 308 ntBASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 RNU6-1304P-201ENST00000411374 106 ntBASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 AL590762.4-201ENST00000425885 253 ntBASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 HMGB3P22-202ENST00000451823 572 ntBASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 HIGD1AP8-201ENST00000453927 274 ntBASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 AC090142.1-201ENST00000465776 462 ntBASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 AC104986.1-201ENST00000517978 436 ntBASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 HMGB1P41-201ENST00000520234 440 ntBASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 AC090312.2-201ENST00000582687 378 ntBASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 RNU6-89P-201ENST00000606519 100 ntBASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 AL390240.1-201ENST00000612950 384 ntBASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 AC023509.5-201ENST00000617434 807 ntBASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 AC090337.1-201ENST00000579651 2074 ntBASIC5.67□□□□□ -1.5
SHKBP1Q8TBC3 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 RNU6-1097P-201ENST00000363586 107 ntBASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 RNU4-1-201ENST00000363925 141 ntBASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 SNORA5.1-201ENST00000384275 131 ntBASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 U3.23-201ENST00000391132 200 ntBASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 RN7SKP106-201ENST00000410832 272 ntBASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 HMGB3P2-201ENST00000411913 584 ntBASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 UQCRBP1-201ENST00000421129 336 ntBASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 AC019097.1-201ENST00000424783 735 ntBASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 AL353777.1-201ENST00000425552 326 ntBASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 AC093655.2-201ENST00000425735 631 ntBASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 ERLEC1P1-201ENST00000433806 578 ntBASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 CEACAMP7-201ENST00000444105 496 ntBASIC5.66□□□□□ -1.5
SHKBP1Q8TBC3 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms