Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.1□□□□□ -1.43
FOXC1Q12948 RPS4XP20-201ENST00000505751 772 ntBASIC6.1□□□□□ -1.43
FOXC1Q12948 NDUFB5P1-201ENST00000508134 564 ntBASIC6.1□□□□□ -1.43
FOXC1Q12948 RNA5SP434-201ENST00000516647 121 ntBASIC6.1□□□□□ -1.43
FOXC1Q12948 CDH12P4-201ENST00000517835 295 ntBASIC6.1□□□□□ -1.43
FOXC1Q12948 CDH12P3-201ENST00000517935 295 ntBASIC6.1□□□□□ -1.43
FOXC1Q12948 CDH12P1-201ENST00000518435 295 ntBASIC6.1□□□□□ -1.43
FOXC1Q12948 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.1□□□□□ -1.43
FOXC1Q12948 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.1□□□□□ -1.43
FOXC1Q12948 AC010186.2-204ENST00000537668 439 ntBASIC6.1□□□□□ -1.43
FOXC1Q12948 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.1□□□□□ -1.43
FOXC1Q12948 AC087575.1-201ENST00000585087 229 ntBASIC6.1□□□□□ -1.43
FOXC1Q12948 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.1□□□□□ -1.43
FOXC1Q12948 AL591516.1-201ENST00000611326 274 ntBASIC6.1□□□□□ -1.43
FOXC1Q12948 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
FOXC1Q12948 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXC1Q12948 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC6.1□□□□□ -1.43
FOXC1Q12948 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
FOXC1Q12948 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXC1Q12948 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
FOXC1Q12948 AC116535.1-201ENST00000499765 2335 ntTSL 2 BASIC6.1□□□□□ -1.43
FOXC1Q12948 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.1□□□□□ -1.43
FOXC1Q12948 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXC1Q12948 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
FOXC1Q12948 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
FOXC1Q12948 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
FOXC1Q12948 HSPD1P8-201ENST00000400121 1658 ntBASIC6.1□□□□□ -1.43
FOXC1Q12948 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC6.1□□□□□ -1.43
FOXC1Q12948 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
FOXC1Q12948 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC6.1□□□□□ -1.43
FOXC1Q12948 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
FOXC1Q12948 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
FOXC1Q12948 AP2B1-213ENST00000612116 3483 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
FOXC1Q12948 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC6.09□□□□□ -1.43
FOXC1Q12948 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
FOXC1Q12948 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
FOXC1Q12948 NBPF8-201ENST00000583271 5330 ntBASIC6.09□□□□□ -1.43
FOXC1Q12948 MAPK10-347ENST00000641762 2856 ntBASIC6.09□□□□□ -1.43
FOXC1Q12948 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
FOXC1Q12948 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.09□□□□□ -1.43
FOXC1Q12948 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
FOXC1Q12948 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC6.09□□□□□ -1.43
FOXC1Q12948 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.09□□□□□ -1.43
FOXC1Q12948 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
FOXC1Q12948 RNU4-44P-201ENST00000363050 141 ntBASIC6.09□□□□□ -1.43
FOXC1Q12948 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.09□□□□□ -1.43
FOXC1Q12948 MIR1203-201ENST00000408812 85 ntBASIC6.09□□□□□ -1.43
FOXC1Q12948 RNA5SP107-201ENST00000411358 122 ntBASIC6.09□□□□□ -1.43
FOXC1Q12948 DPPA2P3-201ENST00000411853 655 ntBASIC6.09□□□□□ -1.43
FOXC1Q12948 AL035660.1-201ENST00000422041 222 ntBASIC6.09□□□□□ -1.43
FOXC1Q12948 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.09□□□□□ -1.43
FOXC1Q12948 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.09□□□□□ -1.43
FOXC1Q12948 AC013399.1-201ENST00000450311 418 ntBASIC6.09□□□□□ -1.43
FOXC1Q12948 FPGT-203ENST00000467578 601 ntTSL 2 BASIC6.09□□□□□ -1.43
FOXC1Q12948 AC140059.1-201ENST00000489238 361 ntBASIC6.09□□□□□ -1.43
FOXC1Q12948 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.09□□□□□ -1.43
FOXC1Q12948 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.09□□□□□ -1.43
FOXC1Q12948 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.09□□□□□ -1.43
FOXC1Q12948 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC6.09□□□□□ -1.43
FOXC1Q12948 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.09□□□□□ -1.43
FOXC1Q12948 AC091895.1-201ENST00000624494 256 ntBASIC6.09□□□□□ -1.43
FOXC1Q12948 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
FOXC1Q12948 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
FOXC1Q12948 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
FOXC1Q12948 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC6.09□□□□□ -1.43
FOXC1Q12948 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
FOXC1Q12948 AL139805.2-201ENST00000455305 2433 ntBASIC6.09□□□□□ -1.43
FOXC1Q12948 AC020658.2-201ENST00000559030 4020 ntBASIC6.09□□□□□ -1.43
FOXC1Q12948 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
FOXC1Q12948 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
FOXC1Q12948 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
FOXC1Q12948 AC027088.4-201ENST00000611559 1947 ntBASIC6.09□□□□□ -1.44
FOXC1Q12948 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.09□□□□□ -1.44
FOXC1Q12948 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
FOXC1Q12948 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
FOXC1Q12948 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.09□□□□□ -1.44
FOXC1Q12948 C4BPAP1-201ENST00000415474 1893 ntBASIC6.09□□□□□ -1.44
FOXC1Q12948 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
FOXC1Q12948 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
FOXC1Q12948 KIAA0040-202ENST00000444639 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
FOXC1Q12948 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC6.08□□□□□ -1.44
FOXC1Q12948 AP002833.3-201ENST00000625075 2265 ntBASIC6.08□□□□□ -1.44
FOXC1Q12948 EOGT-210ENST00000615922 1931 ntBASIC6.08□□□□□ -1.44
FOXC1Q12948 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
FOXC1Q12948 RNU6-658P-201ENST00000384606 106 ntBASIC6.08□□□□□ -1.44
FOXC1Q12948 Y_RNA.580-201ENST00000391004 95 ntBASIC6.08□□□□□ -1.44
FOXC1Q12948 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
FOXC1Q12948 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.08□□□□□ -1.44
FOXC1Q12948 AL162725.1-201ENST00000435405 301 ntBASIC6.08□□□□□ -1.44
FOXC1Q12948 AC008267.6-201ENST00000441664 139 ntBASIC6.08□□□□□ -1.44
FOXC1Q12948 ENTPD3-AS1-204ENST00000452768 724 ntTSL 2 BASIC6.08□□□□□ -1.44
FOXC1Q12948 AC002553.3-201ENST00000453002 341 ntBASIC6.08□□□□□ -1.44
FOXC1Q12948 RPL23AP81-201ENST00000455252 467 ntBASIC6.08□□□□□ -1.44
FOXC1Q12948 RNU7-138P-201ENST00000459479 64 ntBASIC6.08□□□□□ -1.44
FOXC1Q12948 AL355032.1-201ENST00000472981 438 ntBASIC6.08□□□□□ -1.44
FOXC1Q12948 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
FOXC1Q12948 RPS4XP23-201ENST00000487801 237 ntBASIC6.08□□□□□ -1.44
FOXC1Q12948 AC018437.1-201ENST00000492214 406 ntBASIC6.08□□□□□ -1.44
FOXC1Q12948 AC022206.1-201ENST00000495947 347 ntBASIC6.08□□□□□ -1.44
FOXC1Q12948 SNORD116-28-201ENST00000516123 91 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms