Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RAE1P78406 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RAE1P78406 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.29□□□□□ -1.72
RAE1P78406 AC114546.3-201ENST00000623582 1734 ntBASIC4.29□□□□□ -1.72
RAE1P78406 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
RAE1P78406 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.29□□□□□ -1.72
RAE1P78406 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.29□□□□□ -1.72
RAE1P78406 AC092447.7-201ENST00000422212 1621 ntBASIC4.28□□□□□ -1.72
RAE1P78406 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RAE1P78406 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
RAE1P78406 AC105074.1-201ENST00000623380 3095 ntBASIC4.28□□□□□ -1.72
RAE1P78406 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RAE1P78406 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RAE1P78406 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RAE1P78406 RNU6-1042P-201ENST00000384204 107 ntBASIC4.28□□□□□ -1.72
RAE1P78406 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.28□□□□□ -1.72
RAE1P78406 MIR550A3-201ENST00000390735 95 ntBASIC4.28□□□□□ -1.72
RAE1P78406 RNA5SP397-201ENST00000391323 118 ntBASIC4.28□□□□□ -1.72
RAE1P78406 SDHCP2-201ENST00000398565 501 ntBASIC4.28□□□□□ -1.72
RAE1P78406 RNU2-66P-201ENST00000410650 161 ntBASIC4.28□□□□□ -1.72
RAE1P78406 HMGN1P14-201ENST00000412459 517 ntBASIC4.28□□□□□ -1.72
RAE1P78406 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.28□□□□□ -1.72
RAE1P78406 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.28□□□□□ -1.72
RAE1P78406 AC010975.2-201ENST00000427781 588 ntBASIC4.28□□□□□ -1.72
RAE1P78406 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.28□□□□□ -1.72
RAE1P78406 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.28□□□□□ -1.72
RAE1P78406 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.28□□□□□ -1.72
RAE1P78406 RSU1P2-202ENST00000437884 485 ntBASIC4.28□□□□□ -1.72
RAE1P78406 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.28□□□□□ -1.72
RAE1P78406 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.28□□□□□ -1.72
RAE1P78406 AL357520.1-201ENST00000441557 453 ntBASIC4.28□□□□□ -1.72
RAE1P78406 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.28□□□□□ -1.72
RAE1P78406 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.28□□□□□ -1.72
RAE1P78406 AC012671.1-201ENST00000451912 203 ntBASIC4.28□□□□□ -1.72
RAE1P78406 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.28□□□□□ -1.72
RAE1P78406 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.28□□□□□ -1.72
RAE1P78406 SNORD42A-201ENST00000459584 64 ntBASIC4.28□□□□□ -1.72
RAE1P78406 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.28□□□□□ -1.72
RAE1P78406 RPS20P21-201ENST00000466859 343 ntBASIC4.28□□□□□ -1.72
RAE1P78406 AC083982.1-201ENST00000485679 344 ntBASIC4.28□□□□□ -1.72
RAE1P78406 AC008897.1-201ENST00000494006 347 ntBASIC4.28□□□□□ -1.72
RAE1P78406 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
RAE1P78406 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.28□□□□□ -1.72
RAE1P78406 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.28□□□□□ -1.72
RAE1P78406 KCTD9P2-201ENST00000512203 1013 ntBASIC4.28□□□□□ -1.72
RAE1P78406 AC016065.2-201ENST00000514530 444 ntBASIC4.28□□□□□ -1.72
RAE1P78406 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.28□□□□□ -1.72
RAE1P78406 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.28□□□□□ -1.72
RAE1P78406 IGKV1-32-201ENST00000519290 311 ntBASIC4.28□□□□□ -1.72
RAE1P78406 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.28□□□□□ -1.72
RAE1P78406 OR5AP1P-201ENST00000529730 940 ntBASIC4.28□□□□□ -1.72
RAE1P78406 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.28□□□□□ -1.72
RAE1P78406 ZNF519P3-201ENST00000557158 1032 ntBASIC4.28□□□□□ -1.72
RAE1P78406 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.28□□□□□ -1.72
RAE1P78406 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.28□□□□□ -1.72
RAE1P78406 MIR4307-201ENST00000582802 84 ntBASIC4.28□□□□□ -1.72
RAE1P78406 MIR4512-201ENST00000583257 77 ntBASIC4.28□□□□□ -1.72
RAE1P78406 RPL23AP92-201ENST00000603609 255 ntBASIC4.28□□□□□ -1.72
RAE1P78406 SEPT7P9-203ENST00000604116 343 ntBASIC4.28□□□□□ -1.72
RAE1P78406 AC107304.1-201ENST00000604229 296 ntBASIC4.28□□□□□ -1.72
RAE1P78406 BCRP9-201ENST00000605312 388 ntBASIC4.28□□□□□ -1.72
RAE1P78406 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.28□□□□□ -1.72
RAE1P78406 AC090948.2-201ENST00000607363 564 ntBASIC4.28□□□□□ -1.72
RAE1P78406 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.28□□□□□ -1.72
RAE1P78406 AC008498.1-201ENST00000613012 531 ntBASIC4.28□□□□□ -1.72
RAE1P78406 AC027807.2-201ENST00000616099 408 ntBASIC4.28□□□□□ -1.72
RAE1P78406 MIR6891-201ENST00000618788 93 ntBASIC4.28□□□□□ -1.72
RAE1P78406 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.28□□□□□ -1.72
RAE1P78406 AL445264.1-201ENST00000621719 171 ntBASIC4.28□□□□□ -1.72
RAE1P78406 AL603839.4-201ENST00000624658 1005 ntBASIC4.28□□□□□ -1.72
RAE1P78406 CYP3A51P-201ENST00000633513 256 ntBASIC4.28□□□□□ -1.72
RAE1P78406 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
RAE1P78406 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.28□□□□□ -1.72
RAE1P78406 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
RAE1P78406 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RAE1P78406 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RAE1P78406 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RAE1P78406 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.27□□□□□ -1.73
RAE1P78406 DCAF13P1-201ENST00000495256 1330 ntBASIC4.27□□□□□ -1.73
RAE1P78406 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.27□□□□□ -1.73
RAE1P78406 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.27□□□□□ -1.73
RAE1P78406 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RAE1P78406 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RAE1P78406 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RAE1P78406 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RAE1P78406 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RAE1P78406 RNU6-289P-201ENST00000364093 107 ntBASIC4.27□□□□□ -1.73
RAE1P78406 SNORA58B-201ENST00000364259 136 ntBASIC4.27□□□□□ -1.73
RAE1P78406 RNU6-769P-201ENST00000384407 104 ntBASIC4.27□□□□□ -1.73
RAE1P78406 RNU1-44P-201ENST00000384453 163 ntBASIC4.27□□□□□ -1.73
RAE1P78406 MIR298-201ENST00000401212 88 ntBASIC4.27□□□□□ -1.73
RAE1P78406 HDGFP1-201ENST00000405943 252 ntBASIC4.27□□□□□ -1.73
RAE1P78406 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.27□□□□□ -1.73
RAE1P78406 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.27□□□□□ -1.73
RAE1P78406 RPL30P3-201ENST00000424262 333 ntBASIC4.27□□□□□ -1.73
RAE1P78406 RPS12P10-201ENST00000427031 377 ntBASIC4.27□□□□□ -1.73
RAE1P78406 AL049745.1-201ENST00000433953 286 ntBASIC4.27□□□□□ -1.73
RAE1P78406 AL359265.2-201ENST00000434367 631 ntBASIC4.27□□□□□ -1.73
RAE1P78406 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RAE1P78406 MTND6P18-201ENST00000439477 513 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 178.3 ms