Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.5□□□□□ -2.01
LSM3P62310 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.5□□□□□ -2.01
LSM3P62310 NCAPGP2-201ENST00000557911 754 ntBASIC2.5□□□□□ -2.01
LSM3P62310 BNIP3P5-201ENST00000562290 498 ntBASIC2.5□□□□□ -2.01
LSM3P62310 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.5□□□□□ -2.01
LSM3P62310 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.5□□□□□ -2.01
LSM3P62310 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LSM3P62310 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.5□□□□□ -2.01
LSM3P62310 AC055764.2-201ENST00000610089 670 ntBASIC2.5□□□□□ -2.01
LSM3P62310 BX664608.1-201ENST00000610519 487 ntBASIC2.5□□□□□ -2.01
LSM3P62310 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC2.5□□□□□ -2.01
LSM3P62310 AC006111.3-201ENST00000622137 383 ntBASIC2.5□□□□□ -2.01
LSM3P62310 AC092159.4-201ENST00000624944 550 ntBASIC2.5□□□□□ -2.01
LSM3P62310 AC092184.1-201ENST00000625042 715 ntBASIC2.5□□□□□ -2.01
LSM3P62310 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC2.5□□□□□ -2.01
LSM3P62310 MIR622-201ENST00000638396 96 ntBASIC2.5□□□□□ -2.01
LSM3P62310 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LSM3P62310 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LSM3P62310 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
LSM3P62310 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
LSM3P62310 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
LSM3P62310 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LSM3P62310 AC096656.1-201ENST00000623826 1364 ntBASIC2.49□□□□□ -2.01
LSM3P62310 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.49□□□□□ -2.01
LSM3P62310 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LSM3P62310 AL035425.3-201ENST00000564206 4996 ntBASIC2.49□□□□□ -2.01
LSM3P62310 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.49□□□□□ -2.01
LSM3P62310 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LSM3P62310 RNA5SP124-201ENST00000362739 110 ntBASIC2.49□□□□□ -2.01
LSM3P62310 RNA5SP50-201ENST00000363731 107 ntBASIC2.49□□□□□ -2.01
LSM3P62310 SNORD21-201ENST00000383953 95 ntBASIC2.49□□□□□ -2.01
LSM3P62310 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.49□□□□□ -2.01
LSM3P62310 RNA5SP181-201ENST00000410246 98 ntBASIC2.49□□□□□ -2.01
LSM3P62310 RAD23BP2-201ENST00000416003 1207 ntBASIC2.49□□□□□ -2.01
LSM3P62310 AC241520.1-201ENST00000422654 1099 ntBASIC2.49□□□□□ -2.01
LSM3P62310 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.49□□□□□ -2.01
LSM3P62310 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.49□□□□□ -2.01
LSM3P62310 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.49□□□□□ -2.01
LSM3P62310 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
LSM3P62310 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.49□□□□□ -2.01
LSM3P62310 RPS15AP1-201ENST00000457423 391 ntBASIC2.49□□□□□ -2.01
LSM3P62310 RNU7-27P-201ENST00000459281 62 ntBASIC2.49□□□□□ -2.01
LSM3P62310 RN7SL293P-201ENST00000481765 281 ntBASIC2.49□□□□□ -2.01
LSM3P62310 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.49□□□□□ -2.01
LSM3P62310 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC2.49□□□□□ -2.01
LSM3P62310 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.49□□□□□ -2.01
LSM3P62310 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.49□□□□□ -2.01
LSM3P62310 AC025881.1-201ENST00000518851 512 ntBASIC2.49□□□□□ -2.01
LSM3P62310 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC2.49□□□□□ -2.01
LSM3P62310 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.49□□□□□ -2.01
LSM3P62310 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC2.49□□□□□ -2.01
LSM3P62310 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.49□□□□□ -2.01
LSM3P62310 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.49□□□□□ -2.01
LSM3P62310 ZNF861P-201ENST00000588126 639 ntBASIC2.49□□□□□ -2.01
LSM3P62310 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.49□□□□□ -2.01
LSM3P62310 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.49□□□□□ -2.01
LSM3P62310 AL590392.1-201ENST00000604960 446 ntBASIC2.49□□□□□ -2.01
LSM3P62310 AL451086.1-201ENST00000605596 223 ntBASIC2.49□□□□□ -2.01
LSM3P62310 RNA5SP108-201ENST00000605921 117 ntBASIC2.49□□□□□ -2.01
LSM3P62310 AC016877.3-201ENST00000606778 504 ntBASIC2.49□□□□□ -2.01
LSM3P62310 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.49□□□□□ -2.01
LSM3P62310 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LSM3P62310 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LSM3P62310 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC2.48□□□□□ -2.01
LSM3P62310 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
LSM3P62310 MIR490-201ENST00000384865 128 ntBASIC2.48□□□□□ -2.01
LSM3P62310 RNU6-244P-201ENST00000391028 104 ntBASIC2.48□□□□□ -2.01
LSM3P62310 RNA5SP210-201ENST00000391034 120 ntBASIC2.48□□□□□ -2.01
LSM3P62310 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.48□□□□□ -2.01
LSM3P62310 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LSM3P62310 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.48□□□□□ -2.01
LSM3P62310 RPA2P2-201ENST00000419698 796 ntBASIC2.48□□□□□ -2.01
LSM3P62310 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.48□□□□□ -2.01
LSM3P62310 OR6K1P-201ENST00000456766 971 ntBASIC2.48□□□□□ -2.01
LSM3P62310 HMGB1P25-201ENST00000468402 607 ntBASIC2.48□□□□□ -2.01
LSM3P62310 AC126121.1-201ENST00000482313 553 ntBASIC2.48□□□□□ -2.01
LSM3P62310 AC073522.1-201ENST00000483312 377 ntBASIC2.48□□□□□ -2.01
LSM3P62310 RPS27P27-201ENST00000498779 255 ntBASIC2.48□□□□□ -2.01
LSM3P62310 AC110794.1-201ENST00000505816 425 ntBASIC2.48□□□□□ -2.01
LSM3P62310 AP001960.1-201ENST00000506494 658 ntBASIC2.48□□□□□ -2.01
LSM3P62310 TMEM248P1-201ENST00000510579 951 ntBASIC2.48□□□□□ -2.01
LSM3P62310 HMGN1P15-201ENST00000513870 295 ntBASIC2.48□□□□□ -2.01
LSM3P62310 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.48□□□□□ -2.01
LSM3P62310 RNU4-60P-201ENST00000517239 135 ntBASIC2.48□□□□□ -2.01
LSM3P62310 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.48□□□□□ -2.01
LSM3P62310 OR7K1P-201ENST00000546439 926 ntBASIC2.48□□□□□ -2.01
LSM3P62310 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.48□□□□□ -2.01
LSM3P62310 MIR3690-201ENST00000580266 75 ntBASIC2.48□□□□□ -2.01
LSM3P62310 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.48□□□□□ -2.01
LSM3P62310 AC018754.1-201ENST00000607486 925 ntBASIC2.48□□□□□ -2.01
LSM3P62310 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.48□□□□□ -2.01
LSM3P62310 AL355365.1-201ENST00000616480 294 ntBASIC2.48□□□□□ -2.01
LSM3P62310 AC010297.1-201ENST00000623948 149 ntBASIC2.48□□□□□ -2.01
LSM3P62310 AC015726.3-201ENST00000624501 418 ntBASIC2.48□□□□□ -2.01
LSM3P62310 AP003122.5-201ENST00000527668 3766 ntBASIC2.48□□□□□ -2.01
LSM3P62310 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LSM3P62310 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC2.48□□□□□ -2.01
LSM3P62310 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LSM3P62310 SNORA9.2-201ENST00000365361 133 ntBASIC2.47□□□□□ -2.01
LSM3P62310 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms