Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN6P56747 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.27□□□□□ -1.89
CLDN6P56747 ZNF90P1-201ENST00000480493 1951 ntBASIC3.27□□□□□ -1.89
CLDN6P56747 SEPT7P7-201ENST00000420492 1301 ntBASIC3.27□□□□□ -1.89
CLDN6P56747 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN6P56747 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN6P56747 RNA5SP189-201ENST00000364920 115 ntBASIC3.27□□□□□ -1.89
CLDN6P56747 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN6P56747 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.27□□□□□ -1.89
CLDN6P56747 PRRC2CP1-201ENST00000404428 159 ntBASIC3.27□□□□□ -1.89
CLDN6P56747 BTBD10P2-201ENST00000404779 676 ntBASIC3.27□□□□□ -1.89
CLDN6P56747 AL031121.1-201ENST00000406553 254 ntBASIC3.27□□□□□ -1.89
CLDN6P56747 Z98941.1-201ENST00000407764 100 ntBASIC3.27□□□□□ -1.89
CLDN6P56747 RNU2-17P-201ENST00000410290 190 ntBASIC3.27□□□□□ -1.89
CLDN6P56747 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.27□□□□□ -1.89
CLDN6P56747 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.27□□□□□ -1.89
CLDN6P56747 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.27□□□□□ -1.89
CLDN6P56747 AL590399.6-201ENST00000446396 307 ntBASIC3.27□□□□□ -1.89
CLDN6P56747 CEACAMP4-201ENST00000457676 421 ntBASIC3.27□□□□□ -1.89
CLDN6P56747 AC126121.1-201ENST00000482313 553 ntBASIC3.27□□□□□ -1.89
CLDN6P56747 RPL21P13-201ENST00000488305 481 ntBASIC3.27□□□□□ -1.89
CLDN6P56747 TMEM248P1-201ENST00000510579 951 ntBASIC3.27□□□□□ -1.89
CLDN6P56747 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.27□□□□□ -1.89
CLDN6P56747 HIGD1AP3-201ENST00000515857 278 ntBASIC3.27□□□□□ -1.89
CLDN6P56747 RN7SKP96-201ENST00000516948 297 ntBASIC3.27□□□□□ -1.89
CLDN6P56747 AC022784.5-201ENST00000522241 437 ntBASIC3.27□□□□□ -1.89
CLDN6P56747 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.27□□□□□ -1.89
CLDN6P56747 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.27□□□□□ -1.89
CLDN6P56747 AL121576.1-201ENST00000556055 276 ntBASIC3.27□□□□□ -1.89
CLDN6P56747 AC009101.1-201ENST00000568135 242 ntBASIC3.27□□□□□ -1.89
CLDN6P56747 MIR5004-201ENST00000579078 107 ntBASIC3.27□□□□□ -1.89
CLDN6P56747 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.27□□□□□ -1.89
CLDN6P56747 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.27□□□□□ -1.89
CLDN6P56747 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.27□□□□□ -1.89
CLDN6P56747 AC018754.1-201ENST00000607486 925 ntBASIC3.27□□□□□ -1.89
CLDN6P56747 AC012531.5-201ENST00000611375 151 ntBASIC3.27□□□□□ -1.89
CLDN6P56747 AL137790.1-201ENST00000634283 177 ntBASIC3.27□□□□□ -1.89
CLDN6P56747 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.27□□□□□ -1.89
CLDN6P56747 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN6P56747 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
CLDN6P56747 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
CLDN6P56747 AC066616.2-201ENST00000559334 1481 ntBASIC3.27□□□□□ -1.89
CLDN6P56747 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLDN6P56747 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CLDN6P56747 AL157700.1-201ENST00000561973 1432 ntBASIC3.27□□□□□ -1.89
CLDN6P56747 NSRP1P1-201ENST00000444067 1693 ntBASIC3.27□□□□□ -1.89
CLDN6P56747 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.26□□□□□ -1.89
CLDN6P56747 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CLDN6P56747 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLDN6P56747 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CLDN6P56747 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLDN6P56747 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CLDN6P56747 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLDN6P56747 SNORD115-48-201ENST00000364764 76 ntBASIC3.26□□□□□ -1.89
CLDN6P56747 TAF9BP2-201ENST00000400856 499 ntBASIC3.26□□□□□ -1.89
CLDN6P56747 AL391417.1-201ENST00000404100 426 ntBASIC3.26□□□□□ -1.89
CLDN6P56747 MTHFD2P2-201ENST00000407725 247 ntBASIC3.26□□□□□ -1.89
CLDN6P56747 AC023128.2-201ENST00000420880 1223 ntBASIC3.26□□□□□ -1.89
CLDN6P56747 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.26□□□□□ -1.89
CLDN6P56747 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.26□□□□□ -1.89
CLDN6P56747 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.26□□□□□ -1.89
CLDN6P56747 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.26□□□□□ -1.89
CLDN6P56747 AC084357.1-201ENST00000473404 255 ntBASIC3.26□□□□□ -1.89
CLDN6P56747 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.26□□□□□ -1.89
CLDN6P56747 NCOR1P1-202ENST00000486162 291 ntBASIC3.26□□□□□ -1.89
CLDN6P56747 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.26□□□□□ -1.89
CLDN6P56747 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.26□□□□□ -1.89
CLDN6P56747 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.26□□□□□ -1.89
CLDN6P56747 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.26□□□□□ -1.89
CLDN6P56747 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.26□□□□□ -1.89
CLDN6P56747 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.26□□□□□ -1.89
CLDN6P56747 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.26□□□□□ -1.89
CLDN6P56747 AC010306.1-201ENST00000523223 1117 ntBASIC3.26□□□□□ -1.89
CLDN6P56747 AC008489.1-201ENST00000524271 483 ntBASIC3.26□□□□□ -1.89
CLDN6P56747 C1DP5-201ENST00000525775 383 ntBASIC3.26□□□□□ -1.89
CLDN6P56747 OR5D17P-201ENST00000531492 978 ntBASIC3.26□□□□□ -1.89
CLDN6P56747 AC022080.3-201ENST00000544433 482 ntBASIC3.26□□□□□ -1.89
CLDN6P56747 AP003717.3-201ENST00000544832 1180 ntBASIC3.26□□□□□ -1.89
CLDN6P56747 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.26□□□□□ -1.89
CLDN6P56747 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.26□□□□□ -1.89
CLDN6P56747 YWHAQP7-201ENST00000603536 658 ntBASIC3.26□□□□□ -1.89
CLDN6P56747 AC007998.5-201ENST00000622938 237 ntBASIC3.26□□□□□ -1.89
CLDN6P56747 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CLDN6P56747 AF127577.6-201ENST00000623352 2191 ntBASIC3.26□□□□□ -1.89
CLDN6P56747 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
CLDN6P56747 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.26□□□□□ -1.89
CLDN6P56747 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLDN6P56747 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.26□□□□□ -1.89
CLDN6P56747 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLDN6P56747 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLDN6P56747 MTCO1P24-201ENST00000515438 1558 ntBASIC3.25□□□□□ -1.89
CLDN6P56747 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.25□□□□□ -1.89
CLDN6P56747 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLDN6P56747 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLDN6P56747 Z83843.1-201ENST00000604070 3685 ntBASIC3.25□□□□□ -1.89
CLDN6P56747 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.25□□□□□ -1.89
CLDN6P56747 MIR422A-201ENST00000362286 90 ntBASIC3.25□□□□□ -1.89
CLDN6P56747 SNORA31-201ENST00000362607 130 ntBASIC3.25□□□□□ -1.89
CLDN6P56747 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLDN6P56747 UBE2V1P2-201ENST00000397758 440 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms