Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COPAP53621 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.68□□□□□ -1.66
COPAP53621 AC097493.1-201ENST00000463958 372 ntBASIC4.68□□□□□ -1.66
COPAP53621 AC104763.1-201ENST00000475274 360 ntBASIC4.68□□□□□ -1.66
COPAP53621 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COPAP53621 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.68□□□□□ -1.66
COPAP53621 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.68□□□□□ -1.66
COPAP53621 NDUFA5P2-201ENST00000519723 344 ntBASIC4.68□□□□□ -1.66
COPAP53621 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.68□□□□□ -1.66
COPAP53621 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.68□□□□□ -1.66
COPAP53621 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.68□□□□□ -1.66
COPAP53621 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.68□□□□□ -1.66
COPAP53621 MIR4637-201ENST00000582405 84 ntBASIC4.68□□□□□ -1.66
COPAP53621 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.68□□□□□ -1.66
COPAP53621 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.68□□□□□ -1.66
COPAP53621 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.68□□□□□ -1.66
COPAP53621 AP001981.2-201ENST00000603241 418 ntBASIC4.68□□□□□ -1.66
COPAP53621 AC064872.1-201ENST00000604823 1072 ntBASIC4.68□□□□□ -1.66
COPAP53621 AL133243.1-201ENST00000614487 366 ntBASIC4.68□□□□□ -1.66
COPAP53621 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.68□□□□□ -1.66
COPAP53621 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.68□□□□□ -1.66
COPAP53621 AC055839.1-201ENST00000634467 498 ntBASIC4.68□□□□□ -1.66
COPAP53621 MIR6830-201ENST00000636015 70 ntBASIC4.68□□□□□ -1.66
COPAP53621 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COPAP53621 AC017104.4-201ENST00000636283 1592 ntBASIC4.68□□□□□ -1.66
COPAP53621 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COPAP53621 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
COPAP53621 AC025031.4-201ENST00000621248 3271 ntBASIC4.68□□□□□ -1.66
COPAP53621 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COPAP53621 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COPAP53621 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
COPAP53621 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COPAP53621 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COPAP53621 RNU6-374P-201ENST00000364146 108 ntBASIC4.67□□□□□ -1.66
COPAP53621 RNA5SP88-201ENST00000365560 109 ntBASIC4.67□□□□□ -1.66
COPAP53621 SNORA26.8-201ENST00000391306 124 ntBASIC4.67□□□□□ -1.66
COPAP53621 OR8G2P-201ENST00000412796 908 ntBASIC4.67□□□□□ -1.66
COPAP53621 RPL23AP39-201ENST00000415533 405 ntBASIC4.67□□□□□ -1.66
COPAP53621 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.67□□□□□ -1.66
COPAP53621 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.67□□□□□ -1.66
COPAP53621 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.67□□□□□ -1.66
COPAP53621 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.67□□□□□ -1.66
COPAP53621 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.67□□□□□ -1.66
COPAP53621 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.67□□□□□ -1.66
COPAP53621 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.67□□□□□ -1.66
COPAP53621 SCARNA10-201ENST00000459255 330 ntBASIC4.67□□□□□ -1.66
COPAP53621 AC011276.1-201ENST00000469688 323 ntBASIC4.67□□□□□ -1.66
COPAP53621 RPS15AP17-201ENST00000470598 390 ntBASIC4.67□□□□□ -1.66
COPAP53621 SETP11-201ENST00000473027 690 ntBASIC4.67□□□□□ -1.66
COPAP53621 AC025164.1-201ENST00000496249 478 ntBASIC4.67□□□□□ -1.66
COPAP53621 AC114981.1-201ENST00000503897 678 ntBASIC4.67□□□□□ -1.66
COPAP53621 MTCO3P7-201ENST00000510008 774 ntBASIC4.67□□□□□ -1.66
COPAP53621 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.67□□□□□ -1.66
COPAP53621 RPL12P22-201ENST00000519073 490 ntBASIC4.67□□□□□ -1.66
COPAP53621 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.67□□□□□ -1.66
COPAP53621 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.67□□□□□ -1.66
COPAP53621 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.67□□□□□ -1.66
COPAP53621 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.67□□□□□ -1.66
COPAP53621 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.67□□□□□ -1.66
COPAP53621 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.67□□□□□ -1.66
COPAP53621 AC011260.1-201ENST00000578420 472 ntBASIC4.67□□□□□ -1.66
COPAP53621 AC103987.3-201ENST00000582071 292 ntBASIC4.67□□□□□ -1.66
COPAP53621 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.67□□□□□ -1.66
COPAP53621 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.67□□□□□ -1.66
COPAP53621 AC113194.1-201ENST00000606037 500 ntBASIC4.67□□□□□ -1.66
COPAP53621 RN7SKP299-201ENST00000606679 301 ntBASIC4.67□□□□□ -1.66
COPAP53621 RNU6-88P-201ENST00000606801 100 ntBASIC4.67□□□□□ -1.66
COPAP53621 AL159169.3-201ENST00000608871 561 ntBASIC4.67□□□□□ -1.66
COPAP53621 AC012409.3-201ENST00000611343 981 ntBASIC4.67□□□□□ -1.66
COPAP53621 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.67□□□□□ -1.66
COPAP53621 AC004825.2-201ENST00000616634 455 ntBASIC4.67□□□□□ -1.66
COPAP53621 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.67□□□□□ -1.66
COPAP53621 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.67□□□□□ -1.66
COPAP53621 AC092192.1-201ENST00000633154 1018 ntBASIC4.67□□□□□ -1.66
COPAP53621 U6.101-201ENST00000637707 76 ntBASIC4.67□□□□□ -1.66
COPAP53621 FAM157B-203ENST00000639350 358 ntBASIC4.67□□□□□ -1.66
COPAP53621 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.67□□□□□ -1.66
COPAP53621 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
COPAP53621 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COPAP53621 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
COPAP53621 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
COPAP53621 AC027290.2-201ENST00000623210 18662 ntBASIC4.67□□□□□ -1.66
COPAP53621 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COPAP53621 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COPAP53621 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COPAP53621 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.66□□□□□ -1.66
COPAP53621 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COPAP53621 AL390237.1-201ENST00000404226 1415 ntBASIC4.66□□□□□ -1.66
COPAP53621 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
COPAP53621 LINC00561-201ENST00000565815 2738 ntBASIC4.66□□□□□ -1.66
COPAP53621 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COPAP53621 RNA5SP509-201ENST00000364577 119 ntBASIC4.66□□□□□ -1.66
COPAP53621 SNORA51.6-201ENST00000384151 125 ntBASIC4.66□□□□□ -1.66
COPAP53621 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
COPAP53621 EIF5P1-201ENST00000400019 1231 ntBASIC4.66□□□□□ -1.66
COPAP53621 Z98745.1-201ENST00000402553 494 ntBASIC4.66□□□□□ -1.66
COPAP53621 BTBD10P2-201ENST00000404779 676 ntBASIC4.66□□□□□ -1.66
COPAP53621 AC004987.3-201ENST00000413879 771 ntBASIC4.66□□□□□ -1.66
COPAP53621 Z99497.1-201ENST00000421282 135 ntBASIC4.66□□□□□ -1.66
COPAP53621 RPL7AP25-201ENST00000423357 805 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms