Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXC8P31273 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXC8P31273 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HOXC8P31273 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXC8P31273 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HOXC8P31273 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.21□□□□□ -1.73
HOXC8P31273 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
HOXC8P31273 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.21□□□□□ -1.74
HOXC8P31273 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
HOXC8P31273 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
HOXC8P31273 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXC8P31273 ZNF962P-201ENST00000443465 3140 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXC8P31273 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HOXC8P31273 RN7SKP44-201ENST00000363602 316 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 RNU6-761P-201ENST00000384148 107 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 SNORA9-201ENST00000384215 133 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 PTMAP5-201ENST00000393073 333 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 RPS3AP9-201ENST00000417027 792 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.21□□□□□ -1.74
HOXC8P31273 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HOXC8P31273 GTF2IP3-201ENST00000433887 494 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.21□□□□□ -1.74
HOXC8P31273 RPL23AP33-201ENST00000442301 452 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 NDUFA5P7-201ENST00000452914 242 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 AP000926.1-201ENST00000479573 241 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
HOXC8P31273 RPL21P131-201ENST00000497298 483 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 PRELID3BP7-201ENST00000503606 469 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 AC011352.3-201ENST00000505162 593 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 AC008837.1-201ENST00000511513 412 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.21□□□□□ -1.74
HOXC8P31273 snoZ278.1-201ENST00000517059 112 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.21□□□□□ -1.74
HOXC8P31273 OR5M7P-201ENST00000526140 972 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HOXC8P31273 NDUFS5P6-201ENST00000529136 295 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 OR8I1P-201ENST00000529291 931 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.21□□□□□ -1.74
HOXC8P31273 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.21□□□□□ -1.74
HOXC8P31273 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.21□□□□□ -1.74
HOXC8P31273 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.21□□□□□ -1.74
HOXC8P31273 MTND6P33-201ENST00000571794 183 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 AL121834.1-201ENST00000572284 509 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.21□□□□□ -1.74
HOXC8P31273 NIFKP6-201ENST00000598115 845 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 AL020997.3-201ENST00000602843 359 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 AC012468.1-201ENST00000604888 430 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 AC007179.3-201ENST00000604976 235 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 HSPE1P14-201ENST00000605812 302 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.21□□□□□ -1.74
HOXC8P31273 U73479.1-201ENST00000618062 168 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 AC012314.7-201ENST00000619693 93 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 MTND2P41-201ENST00000637599 773 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.21□□□□□ -1.74
HOXC8P31273 PNPT1P2-201ENST00000456768 2050 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HOXC8P31273 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HOXC8P31273 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HOXC8P31273 DCAF13P1-201ENST00000495256 1330 ntBASIC4.21□□□□□ -1.74
HOXC8P31273 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
HOXC8P31273 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXC8P31273 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXC8P31273 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
HOXC8P31273 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXC8P31273 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HOXC8P31273 AC092435.4-201ENST00000623012 4159 ntBASIC4.2□□□□□ -1.74
HOXC8P31273 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HOXC8P31273 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXC8P31273 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.2□□□□□ -1.74
HOXC8P31273 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HOXC8P31273 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
HOXC8P31273 Y_RNA.333-201ENST00000365274 102 ntBASIC4.2□□□□□ -1.74
HOXC8P31273 MIR513B-201ENST00000385136 84 ntBASIC4.2□□□□□ -1.74
HOXC8P31273 RPL7P60-201ENST00000397636 735 ntBASIC4.2□□□□□ -1.74
HOXC8P31273 AL121978.1-201ENST00000402778 359 ntBASIC4.2□□□□□ -1.74
HOXC8P31273 RNA5SP239-201ENST00000410218 129 ntBASIC4.2□□□□□ -1.74
HOXC8P31273 RNU4-22P-201ENST00000411058 166 ntBASIC4.2□□□□□ -1.74
HOXC8P31273 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXC8P31273 MTND4P3-201ENST00000417829 541 ntBASIC4.2□□□□□ -1.74
HOXC8P31273 AC068533.1-201ENST00000418542 415 ntBASIC4.2□□□□□ -1.74
HOXC8P31273 OR2X1P-201ENST00000421144 687 ntBASIC4.2□□□□□ -1.74
HOXC8P31273 AC092832.1-201ENST00000422934 400 ntBASIC4.2□□□□□ -1.74
HOXC8P31273 RPP40P1-201ENST00000426762 456 ntBASIC4.2□□□□□ -1.74
HOXC8P31273 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXC8P31273 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXC8P31273 CR769776.1-201ENST00000441254 787 ntBASIC4.2□□□□□ -1.74
HOXC8P31273 Z73417.1-201ENST00000447373 778 ntBASIC4.2□□□□□ -1.74
HOXC8P31273 ZNF886P-201ENST00000450781 723 ntBASIC4.2□□□□□ -1.74
HOXC8P31273 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.2□□□□□ -1.74
HOXC8P31273 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXC8P31273 PTGES3P5-201ENST00000455109 434 ntBASIC4.2□□□□□ -1.74
HOXC8P31273 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.2□□□□□ -1.74
HOXC8P31273 RPL31P61-201ENST00000496160 376 ntBASIC4.2□□□□□ -1.74
HOXC8P31273 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXC8P31273 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.2□□□□□ -1.74
HOXC8P31273 AC048346.1-201ENST00000510247 144 ntBASIC4.2□□□□□ -1.74
HOXC8P31273 AC104619.4-201ENST00000510773 249 ntBASIC4.2□□□□□ -1.74
HOXC8P31273 VWA8P1-201ENST00000510889 176 ntBASIC4.2□□□□□ -1.74
HOXC8P31273 AC109471.1-201ENST00000511631 612 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms