Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLIP1P30622 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLIP1P30622 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.33□□□□□ -1.72
CLIP1P30622 EEF1B2P7-201ENST00000451177 676 ntBASIC4.33□□□□□ -1.72
CLIP1P30622 NIPA2P2-201ENST00000496376 1083 ntBASIC4.33□□□□□ -1.72
CLIP1P30622 DYNLL1P6-201ENST00000503440 264 ntBASIC4.33□□□□□ -1.72
CLIP1P30622 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.33□□□□□ -1.72
CLIP1P30622 AC006445.2-201ENST00000510061 472 ntBASIC4.33□□□□□ -1.72
CLIP1P30622 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.33□□□□□ -1.72
CLIP1P30622 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.33□□□□□ -1.72
CLIP1P30622 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.33□□□□□ -1.72
CLIP1P30622 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLIP1P30622 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.33□□□□□ -1.72
CLIP1P30622 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
CLIP1P30622 AC005046.1-201ENST00000608515 625 ntBASIC4.33□□□□□ -1.72
CLIP1P30622 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC4.33□□□□□ -1.72
CLIP1P30622 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC4.33□□□□□ -1.72
CLIP1P30622 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CLIP1P30622 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.33□□□□□ -1.72
CLIP1P30622 AC005183.1-201ENST00000603687 1979 ntBASIC4.33□□□□□ -1.72
CLIP1P30622 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CLIP1P30622 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLIP1P30622 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CLIP1P30622 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CLIP1P30622 RNA5SP432-201ENST00000362480 116 ntBASIC4.32□□□□□ -1.72
CLIP1P30622 AL356057.1-202ENST00000402263 756 ntBASIC4.32□□□□□ -1.72
CLIP1P30622 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.32□□□□□ -1.72
CLIP1P30622 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.32□□□□□ -1.72
CLIP1P30622 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.32□□□□□ -1.72
CLIP1P30622 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.32□□□□□ -1.72
CLIP1P30622 AL513328.1-201ENST00000446460 224 ntBASIC4.32□□□□□ -1.72
CLIP1P30622 RPL23AP31-201ENST00000456160 467 ntBASIC4.32□□□□□ -1.72
CLIP1P30622 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.32□□□□□ -1.72
CLIP1P30622 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC4.32□□□□□ -1.72
CLIP1P30622 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.32□□□□□ -1.72
CLIP1P30622 DLEU2_6.1-201ENST00000610536 112 ntBASIC4.32□□□□□ -1.72
CLIP1P30622 Z99129.2-201ENST00000619967 314 ntBASIC4.32□□□□□ -1.72
CLIP1P30622 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CLIP1P30622 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.32□□□□□ -1.72
CLIP1P30622 AC007342.7-201ENST00000624610 2337 ntBASIC4.31□□□□□ -1.72
CLIP1P30622 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.31□□□□□ -1.72
CLIP1P30622 OR13C3-201ENST00000374781 1108 ntBASIC4.31□□□□□ -1.72
CLIP1P30622 HSPD1P16-201ENST00000402302 394 ntBASIC4.31□□□□□ -1.72
CLIP1P30622 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.31□□□□□ -1.72
CLIP1P30622 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.31□□□□□ -1.72
CLIP1P30622 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CLIP1P30622 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
CLIP1P30622 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.31□□□□□ -1.72
CLIP1P30622 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLIP1P30622 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLIP1P30622 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLIP1P30622 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLIP1P30622 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLIP1P30622 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.3□□□□□ -1.72
CLIP1P30622 AC073136.2-201ENST00000417282 849 ntBASIC4.3□□□□□ -1.72
CLIP1P30622 EXTL2P1-201ENST00000446218 416 ntBASIC4.3□□□□□ -1.72
CLIP1P30622 PRELID3BP7-201ENST00000503606 469 ntBASIC4.3□□□□□ -1.72
CLIP1P30622 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.3□□□□□ -1.72
CLIP1P30622 RNA5SP282-201ENST00000516355 108 ntBASIC4.3□□□□□ -1.72
CLIP1P30622 SNORA31.21-201ENST00000517180 77 ntBASIC4.3□□□□□ -1.72
CLIP1P30622 PDCD5P1-201ENST00000543528 309 ntBASIC4.3□□□□□ -1.72
CLIP1P30622 MIR3605-201ENST00000583214 100 ntBASIC4.3□□□□□ -1.72
CLIP1P30622 MIR6715A-201ENST00000615929 79 ntBASIC4.3□□□□□ -1.72
CLIP1P30622 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CLIP1P30622 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
CLIP1P30622 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.29□□□□□ -1.72
CLIP1P30622 AC233982.1-201ENST00000451247 436 ntBASIC4.29□□□□□ -1.72
CLIP1P30622 HSPE1P6-201ENST00000479457 291 ntBASIC4.29□□□□□ -1.72
CLIP1P30622 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.29□□□□□ -1.72
CLIP1P30622 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.29□□□□□ -1.72
CLIP1P30622 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.29□□□□□ -1.72
CLIP1P30622 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
CLIP1P30622 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CLIP1P30622 AC093010.3-201ENST00000570269 15214 ntBASIC4.29□□□□□ -1.72
CLIP1P30622 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.29□□□□□ -1.72
CLIP1P30622 AL590004.2-201ENST00000404787 371 ntBASIC4.29□□□□□ -1.72
CLIP1P30622 AL512430.2-201ENST00000406786 339 ntBASIC4.29□□□□□ -1.72
CLIP1P30622 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.29□□□□□ -1.72
CLIP1P30622 AC018797.3-201ENST00000513388 1241 ntBASIC4.29□□□□□ -1.72
CLIP1P30622 AC055876.1-202ENST00000567053 138 ntBASIC4.29□□□□□ -1.72
CLIP1P30622 AC136601.2-201ENST00000604356 474 ntBASIC4.29□□□□□ -1.72
CLIP1P30622 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.29□□□□□ -1.72
CLIP1P30622 AC138393.1-206ENST00000540997 1886 ntBASIC4.28□□□□□ -1.72
CLIP1P30622 ASNSP3-201ENST00000451989 1306 ntBASIC4.28□□□□□ -1.72
CLIP1P30622 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.28□□□□□ -1.72
CLIP1P30622 AC046144.1-201ENST00000478559 1853 ntBASIC4.28□□□□□ -1.72
CLIP1P30622 MIR1183-201ENST00000408856 89 ntBASIC4.28□□□□□ -1.72
CLIP1P30622 AC004987.3-201ENST00000413879 771 ntBASIC4.28□□□□□ -1.72
CLIP1P30622 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.28□□□□□ -1.72
CLIP1P30622 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.28□□□□□ -1.72
CLIP1P30622 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.28□□□□□ -1.72
CLIP1P30622 SNORA9.3-201ENST00000516383 129 ntBASIC4.28□□□□□ -1.72
CLIP1P30622 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CLIP1P30622 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.28□□□□□ -1.72
CLIP1P30622 MIR6817-201ENST00000615588 66 ntBASIC4.28□□□□□ -1.72
CLIP1P30622 AC092628.2-201ENST00000622492 339 ntBASIC4.28□□□□□ -1.72
CLIP1P30622 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
CLIP1P30622 AC109315.1-201ENST00000584143 1347 ntBASIC4.27□□□□□ -1.73
CLIP1P30622 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLIP1P30622 SNORA67.4-201ENST00000384688 142 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms