Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
RAPGEF3O95398 EOGT-210ENST00000615922 1931 ntBASIC6.01□□□□□ -1.45
RAPGEF3O95398 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.01□□□□□ -1.45
RAPGEF3O95398 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
RAPGEF3O95398 RNU5D-1-201ENST00000363299 116 ntBASIC6.01□□□□□ -1.45
RAPGEF3O95398 RNA5SP399-201ENST00000364003 117 ntBASIC6.01□□□□□ -1.45
RAPGEF3O95398 RNA5SP51-201ENST00000364750 119 ntBASIC6.01□□□□□ -1.45
RAPGEF3O95398 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
RAPGEF3O95398 RNU1-44P-201ENST00000384453 163 ntBASIC6.01□□□□□ -1.45
RAPGEF3O95398 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
RAPGEF3O95398 AL355379.1-201ENST00000405542 640 ntBASIC6.01□□□□□ -1.45
RAPGEF3O95398 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC6.01□□□□□ -1.45
RAPGEF3O95398 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC6.01□□□□□ -1.45
RAPGEF3O95398 AL161631.1-201ENST00000417933 486 ntBASIC6.01□□□□□ -1.45
RAPGEF3O95398 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC6.01□□□□□ -1.45
RAPGEF3O95398 AC236972.1-201ENST00000433225 199 ntBASIC6.01□□□□□ -1.45
RAPGEF3O95398 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC6.01□□□□□ -1.45
RAPGEF3O95398 RPL12P18-201ENST00000437175 325 ntBASIC6.01□□□□□ -1.45
RAPGEF3O95398 NPM1P39-201ENST00000449818 867 ntBASIC6.01□□□□□ -1.45
RAPGEF3O95398 AC243772.1-201ENST00000451620 410 ntBASIC6.01□□□□□ -1.45
RAPGEF3O95398 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC6.01□□□□□ -1.45
RAPGEF3O95398 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC6.01□□□□□ -1.45
RAPGEF3O95398 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC6.01□□□□□ -1.45
RAPGEF3O95398 HMGN1P11-201ENST00000508668 303 ntBASIC6.01□□□□□ -1.45
RAPGEF3O95398 MTCO3P7-201ENST00000510008 774 ntBASIC6.01□□□□□ -1.45
RAPGEF3O95398 RN7SKP289-201ENST00000517244 295 ntBASIC6.01□□□□□ -1.45
RAPGEF3O95398 AC007954.1-201ENST00000554198 494 ntBASIC6.01□□□□□ -1.45
RAPGEF3O95398 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC6.01□□□□□ -1.45
RAPGEF3O95398 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC6.01□□□□□ -1.45
RAPGEF3O95398 AP000811.1-201ENST00000603803 651 ntBASIC6.01□□□□□ -1.45
RAPGEF3O95398 AC064872.1-201ENST00000604823 1072 ntBASIC6.01□□□□□ -1.45
RAPGEF3O95398 AC005332.6-201ENST00000613178 446 ntBASIC6.01□□□□□ -1.45
RAPGEF3O95398 AL607023.1-201ENST00000620045 248 ntBASIC6.01□□□□□ -1.45
RAPGEF3O95398 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
RAPGEF3O95398 MTND4P34-201ENST00000572715 1371 ntBASIC6.01□□□□□ -1.45
RAPGEF3O95398 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
RAPGEF3O95398 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC6.01□□□□□ -1.45
RAPGEF3O95398 ANKRD20A17P-201ENST00000511745 1330 ntBASIC6□□□□□ -1.45
RAPGEF3O95398 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
RAPGEF3O95398 AL353743.4-201ENST00000422653 1547 ntBASIC6□□□□□ -1.45
RAPGEF3O95398 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
RAPGEF3O95398 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
RAPGEF3O95398 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RAPGEF3O95398 AC011755.1-201ENST00000623763 2049 ntBASIC6□□□□□ -1.45
RAPGEF3O95398 SUGT1P1-201ENST00000379514 476 ntBASIC6□□□□□ -1.45
RAPGEF3O95398 AL138880.1-201ENST00000405824 642 ntBASIC6□□□□□ -1.45
RAPGEF3O95398 AL139098.1-201ENST00000407291 389 ntBASIC6□□□□□ -1.45
RAPGEF3O95398 RNU2-42P-201ENST00000410697 113 ntBASIC6□□□□□ -1.45
RAPGEF3O95398 RNU6-272P-201ENST00000411028 104 ntBASIC6□□□□□ -1.45
RAPGEF3O95398 SKP1P3-201ENST00000429280 487 ntBASIC6□□□□□ -1.45
RAPGEF3O95398 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC6□□□□□ -1.45
RAPGEF3O95398 AL590103.1-201ENST00000434488 307 ntBASIC6□□□□□ -1.45
RAPGEF3O95398 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC6□□□□□ -1.45
RAPGEF3O95398 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC6□□□□□ -1.45
RAPGEF3O95398 RPL7P59-201ENST00000447700 943 ntBASIC6□□□□□ -1.45
RAPGEF3O95398 AL591363.1-201ENST00000450091 483 ntBASIC6□□□□□ -1.45
RAPGEF3O95398 EIF4A1P11-201ENST00000451239 222 ntBASIC6□□□□□ -1.45
RAPGEF3O95398 SUN3-208ENST00000453192 801 ntTSL 5 BASIC6□□□□□ -1.45
RAPGEF3O95398 AL136126.1-201ENST00000473603 402 ntBASIC6□□□□□ -1.45
RAPGEF3O95398 AC005912.1-201ENST00000495392 255 ntBASIC6□□□□□ -1.45
RAPGEF3O95398 RPL29P14-201ENST00000495837 428 ntBASIC6□□□□□ -1.45
RAPGEF3O95398 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC6□□□□□ -1.45
RAPGEF3O95398 AC109471.1-201ENST00000511631 612 ntBASIC6□□□□□ -1.45
RAPGEF3O95398 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC6□□□□□ -1.45
RAPGEF3O95398 AC008494.2-201ENST00000514544 370 ntBASIC6□□□□□ -1.45
RAPGEF3O95398 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC6□□□□□ -1.45
RAPGEF3O95398 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC6□□□□□ -1.45
RAPGEF3O95398 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC6□□□□□ -1.45
RAPGEF3O95398 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC6□□□□□ -1.45
RAPGEF3O95398 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC6□□□□□ -1.45
RAPGEF3O95398 RPL23AP87-202ENST00000573039 466 ntBASIC6□□□□□ -1.45
RAPGEF3O95398 AC112220.3-201ENST00000605502 502 ntBASIC6□□□□□ -1.45
RAPGEF3O95398 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC6□□□□□ -1.45
RAPGEF3O95398 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC6□□□□□ -1.45
RAPGEF3O95398 AC019278.1-201ENST00000623516 479 ntBASIC6□□□□□ -1.45
RAPGEF3O95398 AC098679.5-201ENST00000624394 571 ntBASIC6□□□□□ -1.45
RAPGEF3O95398 AC007494.3-201ENST00000624660 743 ntBASIC6□□□□□ -1.45
RAPGEF3O95398 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
RAPGEF3O95398 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RAPGEF3O95398 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
RAPGEF3O95398 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.99□□□□□ -1.45
RAPGEF3O95398 AC011477.1-204ENST00000623416 1325 ntBASIC5.99□□□□□ -1.45
RAPGEF3O95398 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC5.99□□□□□ -1.45
RAPGEF3O95398 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RAPGEF3O95398 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RAPGEF3O95398 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RAPGEF3O95398 CR381670.1-201ENST00000624291 1693 ntBASIC5.99□□□□□ -1.45
RAPGEF3O95398 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
RAPGEF3O95398 RNU6-1151P-201ENST00000384684 107 ntBASIC5.99□□□□□ -1.45
RAPGEF3O95398 AL133264.1-201ENST00000407157 562 ntBASIC5.99□□□□□ -1.45
RAPGEF3O95398 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC5.99□□□□□ -1.45
RAPGEF3O95398 AC234782.4-201ENST00000417646 1048 ntBASIC5.99□□□□□ -1.45
RAPGEF3O95398 TIMM9P2-201ENST00000419324 266 ntBASIC5.99□□□□□ -1.45
RAPGEF3O95398 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC5.99□□□□□ -1.45
RAPGEF3O95398 RPL31P54-201ENST00000429803 370 ntBASIC5.99□□□□□ -1.45
RAPGEF3O95398 AC244035.1-201ENST00000430042 390 ntBASIC5.99□□□□□ -1.45
RAPGEF3O95398 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.99□□□□□ -1.45
RAPGEF3O95398 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.99□□□□□ -1.45
RAPGEF3O95398 RPL12P26-201ENST00000452430 487 ntBASIC5.99□□□□□ -1.45
RAPGEF3O95398 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms