Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC093303.1-201ENST00000514549 295 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 Y_RNA.720-201ENST00000517166 92 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 RNU6-988P-201ENST00000519081 107 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 AL118558.2-201ENST00000556294 238 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 AC124068.1-201ENST00000563131 678 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 AC100830.2-201ENST00000581636 240 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 AC133644.2-201ENST00000608142 540 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 AL139124.1-201ENST00000609123 421 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 AL390240.1-201ENST00000612950 384 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 AL021918.2-201ENST00000613415 194 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 AL590099.1-201ENST00000615276 138 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 uc_338.22-201ENST00000622722 187 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 AC244517.12-201ENST00000623581 663 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 DNM1P47-203ENST00000571780 12667 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 AC009229.4-201ENST00000623854 1947 ntBASIC5.01□□□□□ -1.61
SHISA3A0PJX4 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SHISA3A0PJX4 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5□□□□□ -1.61
SHISA3A0PJX4 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SHISA3A0PJX4 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SHISA3A0PJX4 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
SHISA3A0PJX4 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHISA3A0PJX4 ADAM5-202ENST00000399789 1942 ntBASIC5□□□□□ -1.61
SHISA3A0PJX4 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SHISA3A0PJX4 AL121886.1-201ENST00000358609 435 ntBASIC5□□□□□ -1.61
SHISA3A0PJX4 Y_RNA.28-201ENST00000362554 111 ntBASIC5□□□□□ -1.61
SHISA3A0PJX4 Y_RNA.167-201ENST00000363735 109 ntBASIC5□□□□□ -1.61
SHISA3A0PJX4 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5□□□□□ -1.61
SHISA3A0PJX4 MIR130A-201ENST00000385274 89 ntBASIC5□□□□□ -1.61
SHISA3A0PJX4 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
SHISA3A0PJX4 RNU2-21P-201ENST00000410368 188 ntBASIC5□□□□□ -1.61
SHISA3A0PJX4 RPL31P2-201ENST00000413849 377 ntBASIC5□□□□□ -1.61
SHISA3A0PJX4 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5□□□□□ -1.61
SHISA3A0PJX4 AL139396.1-201ENST00000421137 167 ntBASIC5□□□□□ -1.61
SHISA3A0PJX4 PMCHL1-202ENST00000423102 261 ntBASIC5□□□□□ -1.61
SHISA3A0PJX4 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5□□□□□ -1.61
SHISA3A0PJX4 AL645936.1-201ENST00000441979 518 ntBASIC5□□□□□ -1.61
SHISA3A0PJX4 RPL21P133-201ENST00000443666 476 ntBASIC5□□□□□ -1.61
SHISA3A0PJX4 RPL23AP43-201ENST00000446445 471 ntBASIC5□□□□□ -1.61
SHISA3A0PJX4 HMGB3P22-202ENST00000451823 572 ntBASIC5□□□□□ -1.61
SHISA3A0PJX4 RNU1-88P-201ENST00000459274 128 ntBASIC5□□□□□ -1.61
SHISA3A0PJX4 AC011476.1-201ENST00000466725 307 ntBASIC5□□□□□ -1.61
SHISA3A0PJX4 AC006967.1-201ENST00000467608 589 ntBASIC5□□□□□ -1.61
SHISA3A0PJX4 ST13P14-201ENST00000474095 734 ntBASIC5□□□□□ -1.61
SHISA3A0PJX4 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5□□□□□ -1.61
SHISA3A0PJX4 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHISA3A0PJX4 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5□□□□□ -1.61
SHISA3A0PJX4 RNU6-1088P-201ENST00000516850 104 ntBASIC5□□□□□ -1.61
SHISA3A0PJX4 COPS8P3-201ENST00000526024 482 ntBASIC5□□□□□ -1.61
SHISA3A0PJX4 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHISA3A0PJX4 AL137161.1-201ENST00000532231 390 ntBASIC5□□□□□ -1.61
SHISA3A0PJX4 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5□□□□□ -1.61
SHISA3A0PJX4 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5□□□□□ -1.61
SHISA3A0PJX4 AC063950.1-201ENST00000552036 308 ntBASIC5□□□□□ -1.61
SHISA3A0PJX4 IMMP1LP2-201ENST00000552954 492 ntBASIC5□□□□□ -1.61
SHISA3A0PJX4 DNAJC8P1-201ENST00000554535 372 ntBASIC5□□□□□ -1.61
SHISA3A0PJX4 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5□□□□□ -1.61
SHISA3A0PJX4 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5□□□□□ -1.61
SHISA3A0PJX4 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5□□□□□ -1.61
SHISA3A0PJX4 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5□□□□□ -1.61
SHISA3A0PJX4 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SHISA3A0PJX4 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
SHISA3A0PJX4 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
SHISA3A0PJX4 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5□□□□□ -1.61
SHISA3A0PJX4 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5□□□□□ -1.61
SHISA3A0PJX4 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHISA3A0PJX4 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
SHISA3A0PJX4 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
SHISA3A0PJX4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
SHISA3A0PJX4 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5□□□□□ -1.61
SHISA3A0PJX4 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5□□□□□ -1.61
SHISA3A0PJX4 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SHISA3A0PJX4 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5□□□□□ -1.61
SHISA3A0PJX4 MTND5P10-201ENST00000603719 1809 ntBASIC5□□□□□ -1.61
SHISA3A0PJX4 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5□□□□□ -1.61
SHISA3A0PJX4 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SHISA3A0PJX4 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
SHISA3A0PJX4 AC007823.1-201ENST00000569932 1566 ntBASIC4.99□□□□□ -1.61
SHISA3A0PJX4 BCORP1-203ENST00000513194 5093 ntBASIC4.99□□□□□ -1.61
SHISA3A0PJX4 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.99□□□□□ -1.61
SHISA3A0PJX4 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SHISA3A0PJX4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
SHISA3A0PJX4 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SHISA3A0PJX4 DMD-228ENST00000541735 7080 ntTSL 5 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms