Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ATG4BQ9Y4P1 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 U1.1-201ENST00000384101 164 ntBASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 RN7SKP56-201ENST00000410513 331 ntBASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 EI24P1-201ENST00000416584 867 ntBASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 HMGB3P5-201ENST00000428894 612 ntBASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 FTH1P6-201ENST00000430768 320 ntBASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 PTGES3P1-201ENST00000439531 483 ntBASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 NPM1P13-201ENST00000452663 865 ntBASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 AC084198.1-201ENST00000477747 402 ntBASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 RN7SL323P-201ENST00000494712 295 ntBASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 AC093752.1-206ENST00000511823 336 ntBASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 AC010342.1-201ENST00000514047 877 ntBASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 SCARNA14-201ENST00000516903 136 ntBASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 AC023632.1-201ENST00000518463 375 ntBASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 AC022695.1-201ENST00000522089 237 ntBASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 AC092470.1-201ENST00000546187 132 ntBASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 HSPE1P5-201ENST00000561489 272 ntBASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 VN1R79P-201ENST00000593540 513 ntBASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 AC069431.2-201ENST00000604149 1099 ntBASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 AC112230.1-201ENST00000604342 547 ntBASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 IGHV3-29-201ENST00000604817 344 ntBASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 U73479.1-201ENST00000618062 168 ntBASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 AC079684.1-201ENST00000621405 437 ntBASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 FP236240.3-201ENST00000623061 327 ntBASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 AC138649.5-201ENST00000637456 137 ntBASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ATG4BQ9Y4P1 AC116096.1-201ENST00000566804 2314 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 ZNF734P-201ENST00000419494 1534 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 RNU6-839P-201ENST00000363347 108 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 RNA5SP167-201ENST00000365461 116 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 HLFP1-201ENST00000402375 499 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 RN7SKP202-201ENST00000410439 330 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AL449283.1-202ENST00000418249 604 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 C1DP1-201ENST00000426049 402 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 MTCYBP32-201ENST00000427945 1084 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AC114973.1-201ENST00000429057 632 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 SNORA71B-202ENST00000439232 272 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 TVP23BP2-201ENST00000455082 615 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 TRBV12-2-201ENST00000489763 344 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AC068305.1-201ENST00000497406 726 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AC078918.1-201ENST00000498515 228 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AC108941.1-201ENST00000502853 530 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AC096571.1-202ENST00000506634 735 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 RAC1P2-201ENST00000511164 579 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 USP9YP5-201ENST00000511770 630 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 RNA5SP208-201ENST00000516156 78 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AC091163.3-201ENST00000518269 1144 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AC021451.1-201ENST00000523498 1129 ntBASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.61□□□□□ -1.83
ATG4BQ9Y4P1 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms