Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 CKS1BP6-201ENST00000424932 240 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.05□□□□□ -1.6
VPS11Q9H270 OR4F13P-201ENST00000428478 931 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 FABP7P2-201ENST00000429946 379 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 RPL36P19-201ENST00000430744 301 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 AL365184.2-201ENST00000431139 435 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS11Q9H270 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.05□□□□□ -1.6
VPS11Q9H270 Z80107.2-201ENST00000445127 392 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 Z92846.1-201ENST00000456203 268 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 RPS20P21-201ENST00000466859 343 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 RN7SL466P-201ENST00000497546 295 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS11Q9H270 SNX5P1-201ENST00000505757 1041 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 AC018797.3-201ENST00000513388 1241 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 LRRC34P2-201ENST00000514850 553 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 MTCO1P30-201ENST00000515244 580 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 RNA5SP464-201ENST00000516251 108 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 RN7SKP31-201ENST00000516354 278 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.05□□□□□ -1.6
VPS11Q9H270 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS11Q9H270 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS11Q9H270 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS11Q9H270 AC093027.1-201ENST00000546698 429 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS11Q9H270 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.05□□□□□ -1.6
VPS11Q9H270 AC124068.1-201ENST00000563131 678 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.05□□□□□ -1.6
VPS11Q9H270 AC007151.1-201ENST00000572774 483 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 CYCSP40-201ENST00000575927 294 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 AC069307.1-201ENST00000602820 447 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 AC013553.2-201ENST00000604244 589 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 AC124312.5-201ENST00000604451 268 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 AC106900.2-201ENST00000604994 317 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.05□□□□□ -1.6
VPS11Q9H270 SNORD91B-202ENST00000608459 222 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS11Q9H270 AC138305.3-201ENST00000624988 240 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 AL590763.1-201ENST00000398297 1545 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS11Q9H270 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS11Q9H270 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS11Q9H270 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS11Q9H270 AL022578.1-201ENST00000439330 1433 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS11Q9H270 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.05□□□□□ -1.6
VPS11Q9H270 AC011978.2-201ENST00000569835 2054 ntBASIC5.04□□□□□ -1.6
VPS11Q9H270 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS11Q9H270 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
VPS11Q9H270 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS11Q9H270 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.04□□□□□ -1.6
VPS11Q9H270 MTCO1P23-201ENST00000415223 1526 ntBASIC5.04□□□□□ -1.6
VPS11Q9H270 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS11Q9H270 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
VPS11Q9H270 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS11Q9H270 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS11Q9H270 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS11Q9H270 Y_RNA.132-201ENST00000363421 102 ntBASIC5.04□□□□□ -1.6
VPS11Q9H270 RN7SKP113-201ENST00000363891 295 ntBASIC5.04□□□□□ -1.6
VPS11Q9H270 SNORA67-201ENST00000384423 137 ntBASIC5.04□□□□□ -1.6
VPS11Q9H270 RNU6-441P-201ENST00000384545 106 ntBASIC5.04□□□□□ -1.6
VPS11Q9H270 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
VPS11Q9H270 MTCO3P40-201ENST00000392516 676 ntBASIC5.04□□□□□ -1.6
VPS11Q9H270 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS11Q9H270 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS11Q9H270 AC007742.1-201ENST00000425789 329 ntBASIC5.04□□□□□ -1.6
VPS11Q9H270 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS11Q9H270 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS11Q9H270 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS11Q9H270 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
VPS11Q9H270 RPS25P9-201ENST00000435591 252 ntBASIC5.04□□□□□ -1.6
VPS11Q9H270 ELOCP26-201ENST00000436067 329 ntBASIC5.04□□□□□ -1.6
VPS11Q9H270 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS11Q9H270 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS11Q9H270 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS11Q9H270 MRPL48P1-201ENST00000445390 636 ntBASIC5.04□□□□□ -1.6
VPS11Q9H270 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS11Q9H270 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS11Q9H270 RPL7P31-201ENST00000450192 724 ntBASIC5.04□□□□□ -1.6
VPS11Q9H270 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS11Q9H270 AC108078.1-201ENST00000508073 725 ntBASIC5.04□□□□□ -1.6
VPS11Q9H270 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS11Q9H270 AC009646.1-201ENST00000510455 318 ntBASIC5.04□□□□□ -1.6
VPS11Q9H270 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.04□□□□□ -1.6
VPS11Q9H270 RNU6-1261P-201ENST00000517194 104 ntBASIC5.04□□□□□ -1.6
VPS11Q9H270 AF186190.1-201ENST00000517470 480 ntBASIC5.04□□□□□ -1.6
VPS11Q9H270 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.04□□□□□ -1.6
VPS11Q9H270 ARL2BPP2-201ENST00000550907 489 ntBASIC5.04□□□□□ -1.6
VPS11Q9H270 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS11Q9H270 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.04□□□□□ -1.6
VPS11Q9H270 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS11Q9H270 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS11Q9H270 AC069304.2-201ENST00000605154 435 ntBASIC5.04□□□□□ -1.6
VPS11Q9H270 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC5.04□□□□□ -1.6
VPS11Q9H270 AP005432.2-201ENST00000608162 586 ntBASIC5.04□□□□□ -1.6
VPS11Q9H270 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
VPS11Q9H270 AC109309.2-201ENST00000612597 332 ntBASIC5.04□□□□□ -1.6
VPS11Q9H270 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms