Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.95□□□□□ -1.94
HDHD3Q9BSH5 AC066616.2-201ENST00000559334 1481 ntBASIC2.95□□□□□ -1.94
HDHD3Q9BSH5 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
HDHD3Q9BSH5 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
HDHD3Q9BSH5 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.95□□□□□ -1.94
HDHD3Q9BSH5 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HDHD3Q9BSH5 MTND4P9-201ENST00000507819 1346 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 POMP-202ENST00000460403 1428 ntTSL 3 BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 MIR122-201ENST00000385044 85 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 PPIAP31-201ENST00000405422 495 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 AC004987.3-201ENST00000413879 771 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 NUP35P2-201ENST00000416748 943 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 AC008280.1-201ENST00000418851 412 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 AC013410.2-201ENST00000422627 201 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 AC092832.1-201ENST00000422934 400 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 AL513174.1-201ENST00000423182 629 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 C4BPAP2-201ENST00000428434 478 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 MTCYBP15-201ENST00000433123 1127 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 AC010881.1-201ENST00000433830 235 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 AC234064.1-201ENST00000436312 247 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 USP9YP7-201ENST00000436723 430 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 USP9YP32-201ENST00000452432 430 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 AC007967.1-201ENST00000455422 1159 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 RPL7L1P8-201ENST00000469911 741 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 AC007537.2-201ENST00000472093 511 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 AC118282.2-201ENST00000508739 374 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 SNORA70.19-201ENST00000516717 90 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 AP000790.1-201ENST00000528891 737 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 AC067852.3-201ENST00000589177 561 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 BNIP3P39-201ENST00000601077 554 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 AP005137.2-201ENST00000609238 400 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 AL391834.2-201ENST00000609982 546 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 MIR378J-201ENST00000611988 109 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 AC105227.2-201ENST00000615075 605 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 AC099654.8-201ENST00000637757 681 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 AC011978.2-201ENST00000569835 2054 ntBASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
HDHD3Q9BSH5 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HDHD3Q9BSH5 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
HDHD3Q9BSH5 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HDHD3Q9BSH5 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HDHD3Q9BSH5 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC2.93□□□□□ -1.94
HDHD3Q9BSH5 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC2.93□□□□□ -1.94
HDHD3Q9BSH5 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.93□□□□□ -1.94
HDHD3Q9BSH5 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC2.93□□□□□ -1.94
HDHD3Q9BSH5 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.93□□□□□ -1.94
HDHD3Q9BSH5 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
HDHD3Q9BSH5 SNORD9-201ENST00000362566 104 ntBASIC2.93□□□□□ -1.94
HDHD3Q9BSH5 RNU5E-10P-201ENST00000363506 118 ntBASIC2.93□□□□□ -1.94
HDHD3Q9BSH5 RNA5SP51-201ENST00000364750 119 ntBASIC2.93□□□□□ -1.94
HDHD3Q9BSH5 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
HDHD3Q9BSH5 U8.11-201ENST00000384699 133 ntBASIC2.93□□□□□ -1.94
HDHD3Q9BSH5 U8.12-201ENST00000384701 133 ntBASIC2.93□□□□□ -1.94
HDHD3Q9BSH5 MIR217-201ENST00000384817 110 ntBASIC2.93□□□□□ -1.94
HDHD3Q9BSH5 MIR124-3-201ENST00000384866 87 ntBASIC2.93□□□□□ -1.94
HDHD3Q9BSH5 AC007066.1-201ENST00000392902 381 ntBASIC2.93□□□□□ -1.94
HDHD3Q9BSH5 DSTNP4-201ENST00000399472 474 ntBASIC2.93□□□□□ -1.94
HDHD3Q9BSH5 MTCO1P56-201ENST00000401674 224 ntBASIC2.93□□□□□ -1.94
HDHD3Q9BSH5 MTCO2P31-201ENST00000402702 684 ntBASIC2.93□□□□□ -1.94
HDHD3Q9BSH5 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC2.93□□□□□ -1.94
HDHD3Q9BSH5 GLRXP1-201ENST00000423261 334 ntBASIC2.93□□□□□ -1.94
HDHD3Q9BSH5 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.93□□□□□ -1.94
HDHD3Q9BSH5 C1DP1-201ENST00000426049 402 ntBASIC2.93□□□□□ -1.94
HDHD3Q9BSH5 RSL24D1P6-201ENST00000426934 401 ntBASIC2.93□□□□□ -1.94
HDHD3Q9BSH5 RPL36P19-201ENST00000430744 301 ntBASIC2.93□□□□□ -1.94
HDHD3Q9BSH5 UBE2V1P1-201ENST00000430836 445 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms