Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC005539.1-201ENST00000443768 1479 ntBASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 THAP12P8-201ENST00000447914 2115 ntBASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 SNORA17.3-201ENST00000391159 129 ntBASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 AL513043.1-201ENST00000439124 535 ntBASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 HMGB3P6-201ENST00000444896 598 ntBASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 AL591623.2-201ENST00000449978 222 ntBASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 NIPA2P5-201ENST00000452282 464 ntBASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 RPL23AP11-201ENST00000475260 469 ntBASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 AC078817.1-201ENST00000492623 435 ntBASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 AC117522.3-201ENST00000507974 584 ntBASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 OR5G4P-201ENST00000525251 760 ntBASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 RPP40P2-201ENST00000603596 712 ntBASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 AC079228.1-201ENST00000624774 1049 ntBASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CSMD1Q96PZ7 Y_RNA.178-201ENST00000363832 102 ntBASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 RNA5SP425-201ENST00000410336 112 ntBASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 BX679664.1-201ENST00000434429 253 ntBASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 DNAJC19P1-201ENST00000455312 319 ntBASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 RFESD-208ENST00000513950 464 ntTSL 5 BASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 UBTFL10-201ENST00000528532 562 ntBASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 AC011602.1-201ENST00000546484 331 ntBASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 AC110754.1-201ENST00000399740 601 ntBASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 RNU4-26P-201ENST00000410270 107 ntBASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 MTCO3P16-201ENST00000454456 754 ntBASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 RN7SKP272-201ENST00000516988 232 ntBASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 AC243972.3-201ENST00000539655 198 ntBASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 AL139039.1-201ENST00000401900 692 ntBASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 AL356057.3-201ENST00000402607 340 ntBASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 AL138827.1-201ENST00000402666 306 ntBASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 RPS7P13-201ENST00000413955 498 ntBASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 OR2B8P-201ENST00000432841 938 ntBASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 MRPS18BP2-201ENST00000434310 759 ntBASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 RPS29P6-201ENST00000438196 145 ntBASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 MIR5047-201ENST00000579212 100 ntBASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.35□□□□□ -2.03
CSMD1Q96PZ7 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.34□□□□□ -2.03
CSMD1Q96PZ7 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.34□□□□□ -2.03
CSMD1Q96PZ7 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.34□□□□□ -2.03
CSMD1Q96PZ7 AC006445.2-201ENST00000510061 472 ntBASIC2.34□□□□□ -2.03
CSMD1Q96PZ7 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC2.34□□□□□ -2.03
CSMD1Q96PZ7 CKS1BP1-201ENST00000555221 240 ntBASIC2.34□□□□□ -2.03
CSMD1Q96PZ7 AC141257.3-201ENST00000572906 215 ntBASIC2.34□□□□□ -2.03
CSMD1Q96PZ7 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.34□□□□□ -2.03
CSMD1Q96PZ7 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CSMD1Q96PZ7 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC2.34□□□□□ -2.03
CSMD1Q96PZ7 CYCSP45-201ENST00000402289 315 ntBASIC2.34□□□□□ -2.03
CSMD1Q96PZ7 RPL23AP36-201ENST00000413895 458 ntBASIC2.34□□□□□ -2.03
CSMD1Q96PZ7 AC009263.1-201ENST00000441193 1239 ntBASIC2.34□□□□□ -2.03
CSMD1Q96PZ7 Z99127.3-201ENST00000448158 395 ntBASIC2.34□□□□□ -2.03
CSMD1Q96PZ7 RPL23AP15-201ENST00000450202 459 ntBASIC2.34□□□□□ -2.03
CSMD1Q96PZ7 RPL9P6-201ENST00000492764 598 ntBASIC2.34□□□□□ -2.03
CSMD1Q96PZ7 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.34□□□□□ -2.03
CSMD1Q96PZ7 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.34□□□□□ -2.03
CSMD1Q96PZ7 AC000403.1-201ENST00000613696 3585 ntBASIC2.34□□□□□ -2.03
CSMD1Q96PZ7 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
CSMD1Q96PZ7 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC2.34□□□□□ -2.04
CSMD1Q96PZ7 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CSMD1Q96PZ7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CSMD1Q96PZ7 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
CSMD1Q96PZ7 SNORA36C-201ENST00000384289 132 ntBASIC2.34□□□□□ -2.04
CSMD1Q96PZ7 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.34□□□□□ -2.04
CSMD1Q96PZ7 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC2.34□□□□□ -2.04
CSMD1Q96PZ7 AC090695.1-201ENST00000561269 1222 ntBASIC2.34□□□□□ -2.04
CSMD1Q96PZ7 AP003117.2-201ENST00000606010 545 ntBASIC2.34□□□□□ -2.04
CSMD1Q96PZ7 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.34□□□□□ -2.04
CSMD1Q96PZ7 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.34□□□□□ -2.04
CSMD1Q96PZ7 AC017071.1-201ENST00000564407 2204 ntBASIC2.34□□□□□ -2.04
CSMD1Q96PZ7 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.33□□□□□ -2.04
CSMD1Q96PZ7 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms