Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 HMGN1P15-201ENST00000513870 295 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 RN7SKP13-201ENST00000515933 244 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 RNU4-60P-201ENST00000517239 135 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.25□□□□□ -1.89
COL21A1Q96P44 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.25□□□□□ -1.89
COL21A1Q96P44 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
COL21A1Q96P44 IGKV2D-19-201ENST00000523346 262 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 C1DP5-201ENST00000525775 383 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.25□□□□□ -1.89
COL21A1Q96P44 OR8I1P-201ENST00000529291 931 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 AC103843.2-201ENST00000530523 682 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.25□□□□□ -1.89
COL21A1Q96P44 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.25□□□□□ -1.89
COL21A1Q96P44 OR6C73P-201ENST00000546432 358 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.25□□□□□ -1.89
COL21A1Q96P44 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.25□□□□□ -1.89
COL21A1Q96P44 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.25□□□□□ -1.89
COL21A1Q96P44 AC008739.3-201ENST00000603262 127 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 KATNBL1P5-201ENST00000605015 517 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 AC018816.2-201ENST00000621460 353 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 FRG1DP-201ENST00000635586 771 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
COL21A1Q96P44 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.25□□□□□ -1.89
COL21A1Q96P44 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
COL21A1Q96P44 MFSD8-233ENST00000641482 4860 ntBASIC3.25□□□□□ -1.89
COL21A1Q96P44 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.25□□□□□ -1.89
COL21A1Q96P44 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
COL21A1Q96P44 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
COL21A1Q96P44 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
COL21A1Q96P44 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
COL21A1Q96P44 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
COL21A1Q96P44 MIR483-201ENST00000385070 76 ntBASIC3.24□□□□□ -1.89
COL21A1Q96P44 AL356057.1-202ENST00000402263 756 ntBASIC3.24□□□□□ -1.89
COL21A1Q96P44 MTND3P20-201ENST00000407663 186 ntBASIC3.24□□□□□ -1.89
COL21A1Q96P44 RNU2-21P-201ENST00000410368 188 ntBASIC3.24□□□□□ -1.89
COL21A1Q96P44 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.24□□□□□ -1.89
COL21A1Q96P44 DBIP2-201ENST00000419076 262 ntBASIC3.24□□□□□ -1.89
COL21A1Q96P44 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.24□□□□□ -1.89
COL21A1Q96P44 AL513174.1-201ENST00000423182 629 ntBASIC3.24□□□□□ -1.89
COL21A1Q96P44 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.24□□□□□ -1.89
COL21A1Q96P44 GTF2IP23-201ENST00000423746 351 ntBASIC3.24□□□□□ -1.89
COL21A1Q96P44 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.24□□□□□ -1.89
COL21A1Q96P44 AC091286.1-201ENST00000431233 461 ntBASIC3.24□□□□□ -1.89
COL21A1Q96P44 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.24□□□□□ -1.89
COL21A1Q96P44 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.24□□□□□ -1.89
COL21A1Q96P44 MTCYBP31-201ENST00000438855 1122 ntBASIC3.24□□□□□ -1.89
COL21A1Q96P44 RPL21P23-201ENST00000446654 460 ntBASIC3.24□□□□□ -1.89
COL21A1Q96P44 HMGN1P18-201ENST00000457642 277 ntBASIC3.24□□□□□ -1.89
COL21A1Q96P44 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.24□□□□□ -1.89
COL21A1Q96P44 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.24□□□□□ -1.89
COL21A1Q96P44 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.24□□□□□ -1.89
COL21A1Q96P44 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.24□□□□□ -1.89
COL21A1Q96P44 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.24□□□□□ -1.89
COL21A1Q96P44 MIR2276-201ENST00000516886 89 ntBASIC3.24□□□□□ -1.89
COL21A1Q96P44 HIGD1AP10-201ENST00000527837 282 ntBASIC3.24□□□□□ -1.89
COL21A1Q96P44 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.24□□□□□ -1.89
COL21A1Q96P44 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.24□□□□□ -1.89
COL21A1Q96P44 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.24□□□□□ -1.89
COL21A1Q96P44 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.24□□□□□ -1.89
COL21A1Q96P44 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.24□□□□□ -1.89
COL21A1Q96P44 AC243312.2-201ENST00000623340 601 ntBASIC3.24□□□□□ -1.89
COL21A1Q96P44 AC006065.5-201ENST00000623427 349 ntBASIC3.24□□□□□ -1.89
COL21A1Q96P44 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.24□□□□□ -1.89
COL21A1Q96P44 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.24□□□□□ -1.89
COL21A1Q96P44 AC000367.1-201ENST00000452711 1766 ntBASIC3.24□□□□□ -1.89
COL21A1Q96P44 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
COL21A1Q96P44 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.24□□□□□ -1.89
COL21A1Q96P44 AC007496.3-201ENST00000624987 3443 ntBASIC3.24□□□□□ -1.89
COL21A1Q96P44 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
COL21A1Q96P44 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
COL21A1Q96P44 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.24□□□□□ -1.89
COL21A1Q96P44 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
COL21A1Q96P44 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
COL21A1Q96P44 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
COL21A1Q96P44 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
COL21A1Q96P44 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
COL21A1Q96P44 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
COL21A1Q96P44 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.23□□□□□ -1.89
COL21A1Q96P44 SNORA71.3-201ENST00000362582 128 ntBASIC3.23□□□□□ -1.89
COL21A1Q96P44 RNA5SP383-201ENST00000362934 120 ntBASIC3.23□□□□□ -1.89
COL21A1Q96P44 RNA5SP167-201ENST00000365461 116 ntBASIC3.23□□□□□ -1.89
COL21A1Q96P44 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
COL21A1Q96P44 EIF5P1-201ENST00000400019 1231 ntBASIC3.23□□□□□ -1.89
COL21A1Q96P44 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.23□□□□□ -1.89
COL21A1Q96P44 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.23□□□□□ -1.89
COL21A1Q96P44 RPS15AP40-201ENST00000419621 391 ntBASIC3.23□□□□□ -1.89
COL21A1Q96P44 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
COL21A1Q96P44 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.23□□□□□ -1.89
COL21A1Q96P44 BX890604.2-201ENST00000427883 474 ntBASIC3.23□□□□□ -1.89
COL21A1Q96P44 AP000907.1-201ENST00000428428 510 ntBASIC3.23□□□□□ -1.89
COL21A1Q96P44 AC005189.1-201ENST00000431286 310 ntBASIC3.23□□□□□ -1.89
COL21A1Q96P44 RSL24D1P8-201ENST00000434442 492 ntBASIC3.23□□□□□ -1.89
COL21A1Q96P44 RPL23AP22-201ENST00000437556 453 ntBASIC3.23□□□□□ -1.89
COL21A1Q96P44 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.23□□□□□ -1.89
COL21A1Q96P44 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.23□□□□□ -1.89
COL21A1Q96P44 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.23□□□□□ -1.89
COL21A1Q96P44 RPL37P6-202ENST00000464216 403 ntBASIC3.23□□□□□ -1.89
COL21A1Q96P44 AC006499.5-201ENST00000505037 514 ntBASIC3.23□□□□□ -1.89
COL21A1Q96P44 AC008565.1-201ENST00000509046 885 ntBASIC3.23□□□□□ -1.89
COL21A1Q96P44 AC008885.2-201ENST00000509506 930 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms