Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AL133264.1-201ENST00000407157 562 ntBASIC3.45□□□□□ -1.86
NIPAL3Q6P499 RHEBP3-201ENST00000411920 351 ntBASIC3.45□□□□□ -1.86
NIPAL3Q6P499 AL133384.1-201ENST00000412744 351 ntBASIC3.45□□□□□ -1.86
NIPAL3Q6P499 TOMM22P1-201ENST00000418578 312 ntBASIC3.45□□□□□ -1.86
NIPAL3Q6P499 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 AC005345.1-201ENST00000431868 217 ntBASIC3.45□□□□□ -1.86
NIPAL3Q6P499 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 ARF4P4-201ENST00000439608 520 ntBASIC3.45□□□□□ -1.86
NIPAL3Q6P499 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 VN1R105P-201ENST00000486595 910 ntBASIC3.45□□□□□ -1.86
NIPAL3Q6P499 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 NDUFA5P2-201ENST00000519723 344 ntBASIC3.45□□□□□ -1.86
NIPAL3Q6P499 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 AC068339.2-201ENST00000534395 618 ntBASIC3.45□□□□□ -1.86
NIPAL3Q6P499 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 AC126365.2-201ENST00000580630 379 ntBASIC3.45□□□□□ -1.86
NIPAL3Q6P499 AC008507.2-201ENST00000588402 1176 ntBASIC3.45□□□□□ -1.86
NIPAL3Q6P499 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 AC073968.1-201ENST00000618594 637 ntBASIC3.45□□□□□ -1.86
NIPAL3Q6P499 AL731566.2-201ENST00000618971 317 ntBASIC3.45□□□□□ -1.86
NIPAL3Q6P499 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 OR6C71P-202ENST00000641886 1107 ntBASIC3.45□□□□□ -1.86
NIPAL3Q6P499 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 AF127577.6-201ENST00000623352 2191 ntBASIC3.45□□□□□ -1.86
NIPAL3Q6P499 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.45□□□□□ -1.86
NIPAL3Q6P499 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NIPAL3Q6P499 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NIPAL3Q6P499 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NIPAL3Q6P499 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NIPAL3Q6P499 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NIPAL3Q6P499 HSPA8P1-201ENST00000425843 1833 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NIPAL3Q6P499 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NIPAL3Q6P499 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
NIPAL3Q6P499 MAPK10-372ENST00000641954 3413 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.44□□□□□ -1.86
NIPAL3Q6P499 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
NIPAL3Q6P499 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NIPAL3Q6P499 HMGB1P5-201ENST00000255320 642 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 RNU6-629P-201ENST00000384061 103 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.44□□□□□ -1.86
NIPAL3Q6P499 AL024507.1-201ENST00000412741 274 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 CRYBB2P1-203ENST00000415709 538 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 RPL21P66-201ENST00000426566 466 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 RPL7P2-201ENST00000427639 268 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 MOB1AP1-201ENST00000430903 535 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 VDAC1P3-201ENST00000434069 851 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 NANOGP10-201ENST00000453325 895 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 ANP32BP2-201ENST00000454525 545 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 AC244505.3-201ENST00000454598 187 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 CEACAMP4-201ENST00000457676 421 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.44□□□□□ -1.86
NIPAL3Q6P499 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.44□□□□□ -1.86
NIPAL3Q6P499 AC104629.1-201ENST00000494226 508 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 TRAV31-201ENST00000502780 342 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NIPAL3Q6P499 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.44□□□□□ -1.86
NIPAL3Q6P499 MTCYBP37-201ENST00000510642 1133 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NIPAL3Q6P499 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.44□□□□□ -1.86
NIPAL3Q6P499 RNA5SP208-201ENST00000516156 78 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 SNORA70.14-201ENST00000516205 110 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 RN7SKP21-201ENST00000516503 220 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 RNU6-1073P-201ENST00000517182 106 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.44□□□□□ -1.86
NIPAL3Q6P499 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.44□□□□□ -1.86
NIPAL3Q6P499 AC104417.1-201ENST00000523974 751 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.44□□□□□ -1.86
NIPAL3Q6P499 AC019227.1-201ENST00000526902 510 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.44□□□□□ -1.86
NIPAL3Q6P499 AC109635.4-202ENST00000531666 412 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.44□□□□□ -1.86
NIPAL3Q6P499 AL121576.1-201ENST00000556055 276 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 ZNF192P1-203ENST00000565888 810 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.44□□□□□ -1.86
NIPAL3Q6P499 AC104072.1-201ENST00000568817 668 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 MIR3690-201ENST00000580266 75 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 AC053481.4-201ENST00000583164 216 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.44□□□□□ -1.86
NIPAL3Q6P499 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.44□□□□□ -1.86
NIPAL3Q6P499 AC012531.5-201ENST00000611375 151 ntBASIC3.44□□□□□ -1.86
NIPAL3Q6P499 AC068831.8-201ENST00000620171 435 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 178.9 ms