Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC090425.2-201ENST00000608818 501 ntBASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 MIR6715B-201ENST00000637172 77 ntBASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCDC144BQ3MJ40 AL672167.1-203ENST00000641299 2975 ntBASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 RNA5SP258-201ENST00000362750 119 ntBASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 RNU6-343P-201ENST00000364709 104 ntBASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 SNORA70.10-201ENST00000384515 134 ntBASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 RNA5SP332-201ENST00000391063 115 ntBASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 U3.29-201ENST00000391296 212 ntBASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 AL356421.1-201ENST00000403255 413 ntBASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 AL513174.1-201ENST00000423182 629 ntBASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 DLGAP5P1-201ENST00000430307 464 ntBASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 CKS1BP5-201ENST00000434172 273 ntBASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 AL359265.2-201ENST00000434367 631 ntBASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 RPS29P9-201ENST00000440360 171 ntBASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 AL031584.1-201ENST00000447169 754 ntBASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 TPT1P12-201ENST00000448968 492 ntBASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 snoU109.4-201ENST00000458953 143 ntBASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 RPL23AP56-201ENST00000460778 453 ntBASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 RN7SL385P-201ENST00000468873 276 ntBASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 AC092104.1-201ENST00000497346 1441 ntBASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 TMEM248P1-201ENST00000510579 951 ntBASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 AF131216.2-201ENST00000512316 564 ntBASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 RNA5SP249-201ENST00000516127 99 ntBASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 SMG1P4-204ENST00000523028 4131 ntBASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 AC012339.2-201ENST00000523996 453 ntBASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 AL139089.1-201ENST00000620372 975 ntBASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 MIR6758-201ENST00000620653 63 ntBASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 AL049780.3-201ENST00000624612 1583 ntBASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 CRYM-AS1-204ENST00000637983 556 ntBASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CCDC144BQ3MJ40 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 OR6C69P-201ENST00000394268 893 ntBASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 MIR298-201ENST00000401212 88 ntBASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 RNA5SP56-201ENST00000410277 118 ntBASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 Y_RNA.598-201ENST00000410480 95 ntBASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 AC009480.2-201ENST00000422916 432 ntBASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 OR8F1P-201ENST00000425243 930 ntBASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 AL589823.1-201ENST00000429577 183 ntBASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 Z95327.1-201ENST00000446082 482 ntBASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 SLC25A18P1-201ENST00000449385 454 ntBASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 USP9YP12-201ENST00000450481 570 ntBASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 AC010326.1-201ENST00000462726 602 ntBASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 AL672167.3-201ENST00000465951 960 ntBASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 AC023424.2-201ENST00000493479 777 ntBASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 AC112204.1-201ENST00000502591 103 ntBASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 COX7A2P2-201ENST00000505291 250 ntBASIC5.6□□□□□ -1.51
CCDC144BQ3MJ40 PTGES3P3-201ENST00000511479 482 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms