Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN8P56748 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN8P56748 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN8P56748 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.3□□□□□ -1.88
CLDN8P56748 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CLDN8P56748 RNU6-629P-201ENST00000384061 103 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 RNU6-1151P-201ENST00000384684 107 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 FABP12P1-201ENST00000401911 322 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.3□□□□□ -1.88
CLDN8P56748 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.3□□□□□ -1.88
CLDN8P56748 UBE2V1P9-201ENST00000414760 368 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 MTCO3P12-201ENST00000416718 547 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN8P56748 OFD1P18Y-201ENST00000420889 959 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 RPL31P12-201ENST00000422587 358 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 AC073310.1-201ENST00000423226 1033 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 PNRC2P1-201ENST00000423940 420 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.3□□□□□ -1.88
CLDN8P56748 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN8P56748 RPL23AP82-202ENST00000427528 469 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 AC004975.1-201ENST00000428733 208 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.3□□□□□ -1.88
CLDN8P56748 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN8P56748 HMGB1P15-201ENST00000453854 435 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 SNORD105B-201ENST00000458770 79 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 CENPBD1P1-201ENST00000464061 469 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 RPL23AP14-201ENST00000468281 468 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN8P56748 RPS4XP22-201ENST00000480755 780 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 AC005726.1-201ENST00000494679 427 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN8P56748 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.3□□□□□ -1.88
CLDN8P56748 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN8P56748 HMGN1P11-201ENST00000508668 303 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 RNU6-202P-201ENST00000515998 96 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 SNORA70.18-201ENST00000516696 98 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 IGKV2D-36-201ENST00000518643 226 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 AC107934.2-201ENST00000518653 310 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN8P56748 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN8P56748 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN8P56748 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.3□□□□□ -1.88
CLDN8P56748 AC092470.1-201ENST00000546187 132 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 AL389895.1-201ENST00000554127 252 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.3□□□□□ -1.88
CLDN8P56748 AC233266.2-201ENST00000567067 528 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 AP001029.3-201ENST00000588063 596 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 AC006116.10-201ENST00000591836 581 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 AL355802.4-201ENST00000607635 548 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 AL391497.1-201ENST00000608671 547 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 AC099778.2-201ENST00000610904 211 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 U4.6-201ENST00000621618 127 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CLDN8P56748 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CLDN8P56748 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
CLDN8P56748 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN8P56748 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CLDN8P56748 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.3□□□□□ -1.88
CLDN8P56748 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN8P56748 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
CLDN8P56748 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN8P56748 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.3□□□□□ -1.88
CLDN8P56748 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN8P56748 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CLDN8P56748 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CLDN8P56748 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN8P56748 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN8P56748 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN8P56748 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
CLDN8P56748 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN8P56748 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN8P56748 RNA5SP27-201ENST00000363839 119 ntBASIC3.29□□□□□ -1.88
CLDN8P56748 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN8P56748 RNU6-444P-201ENST00000383988 108 ntBASIC3.29□□□□□ -1.88
CLDN8P56748 Y_RNA.493-201ENST00000384422 102 ntBASIC3.29□□□□□ -1.88
CLDN8P56748 SNORD3H-201ENST00000384486 214 ntBASIC3.29□□□□□ -1.88
CLDN8P56748 SKINT1L-201ENST00000401057 817 ntBASIC3.29□□□□□ -1.88
CLDN8P56748 RSL24D1P1-201ENST00000404972 493 ntBASIC3.29□□□□□ -1.88
CLDN8P56748 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLDN8P56748 AC093578.1-201ENST00000415219 368 ntBASIC3.29□□□□□ -1.88
CLDN8P56748 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN8P56748 AC008280.1-201ENST00000418851 412 ntBASIC3.29□□□□□ -1.88
CLDN8P56748 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN8P56748 RPL7P2-201ENST00000427639 268 ntBASIC3.29□□□□□ -1.88
CLDN8P56748 AC093422.3-201ENST00000428506 305 ntBASIC3.29□□□□□ -1.88
CLDN8P56748 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.29□□□□□ -1.88
CLDN8P56748 AC007000.2-201ENST00000442564 487 ntBASIC3.29□□□□□ -1.88
CLDN8P56748 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.29□□□□□ -1.88
CLDN8P56748 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.29□□□□□ -1.88
CLDN8P56748 MTND5P8-201ENST00000449817 1083 ntBASIC3.29□□□□□ -1.88
CLDN8P56748 NUTF2P7-201ENST00000453086 375 ntBASIC3.29□□□□□ -1.88
CLDN8P56748 ARPC3P2-201ENST00000457786 533 ntBASIC3.29□□□□□ -1.88
CLDN8P56748 RN7SL385P-201ENST00000468873 276 ntBASIC3.29□□□□□ -1.88
CLDN8P56748 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.29□□□□□ -1.88
CLDN8P56748 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.29□□□□□ -1.88
CLDN8P56748 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.29□□□□□ -1.88
CLDN8P56748 AC010265.1-201ENST00000513509 211 ntBASIC3.29□□□□□ -1.88
CLDN8P56748 FABP5P12-201ENST00000515543 389 ntBASIC3.29□□□□□ -1.88
CLDN8P56748 SNORA31.20-201ENST00000517111 133 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms