Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 VWA8P1-201ENST00000510889 176 ntBASIC5.09□□□□□ -1.59
SMARCA2P51531 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC5.09□□□□□ -1.59
SMARCA2P51531 IGKV3-31-201ENST00000523109 329 ntBASIC5.09□□□□□ -1.59
SMARCA2P51531 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.09□□□□□ -1.59
SMARCA2P51531 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.09□□□□□ -1.59
SMARCA2P51531 AL592295.2-201ENST00000612578 206 ntBASIC5.09□□□□□ -1.59
SMARCA2P51531 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.09□□□□□ -1.59
SMARCA2P51531 MTND5P24-201ENST00000438892 1767 ntBASIC5.09□□□□□ -1.59
SMARCA2P51531 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SMARCA2P51531 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SMARCA2P51531 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.08□□□□□ -1.6
SMARCA2P51531 RPL30P2-201ENST00000414021 291 ntBASIC5.08□□□□□ -1.6
SMARCA2P51531 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC5.08□□□□□ -1.6
SMARCA2P51531 RPL23AP23-201ENST00000452590 471 ntBASIC5.08□□□□□ -1.6
SMARCA2P51531 HMGN1P18-201ENST00000457642 277 ntBASIC5.08□□□□□ -1.6
SMARCA2P51531 AC107918.3-201ENST00000533272 382 ntBASIC5.08□□□□□ -1.6
SMARCA2P51531 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.08□□□□□ -1.6
SMARCA2P51531 AC007954.1-201ENST00000554198 494 ntBASIC5.08□□□□□ -1.6
SMARCA2P51531 AC025946.2-201ENST00000603398 234 ntBASIC5.08□□□□□ -1.6
SMARCA2P51531 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC5.08□□□□□ -1.6
SMARCA2P51531 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SMARCA2P51531 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SMARCA2P51531 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
SMARCA2P51531 AC134882.1-201ENST00000603738 1676 ntBASIC5.08□□□□□ -1.6
SMARCA2P51531 AL606537.1-201ENST00000607258 2011 ntBASIC5.08□□□□□ -1.6
SMARCA2P51531 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.08□□□□□ -1.6
SMARCA2P51531 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SMARCA2P51531 ATP5F1P6-201ENST00000402768 767 ntBASIC5.08□□□□□ -1.6
SMARCA2P51531 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.08□□□□□ -1.6
SMARCA2P51531 AC021205.1-201ENST00000468797 348 ntBASIC5.08□□□□□ -1.6
SMARCA2P51531 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.08□□□□□ -1.6
SMARCA2P51531 AP001025.2-201ENST00000490908 477 ntBASIC5.08□□□□□ -1.6
SMARCA2P51531 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.08□□□□□ -1.6
SMARCA2P51531 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC5.08□□□□□ -1.6
SMARCA2P51531 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.08□□□□□ -1.6
SMARCA2P51531 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.08□□□□□ -1.6
SMARCA2P51531 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SMARCA2P51531 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
SMARCA2P51531 LINC01355-201ENST00000566551 5444 ntBASIC5.07□□□□□ -1.6
SMARCA2P51531 Y_RNA.238-201ENST00000364441 102 ntBASIC5.07□□□□□ -1.6
SMARCA2P51531 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.07□□□□□ -1.6
SMARCA2P51531 RPS29P21-201ENST00000496272 170 ntBASIC5.07□□□□□ -1.6
SMARCA2P51531 AC021146.1-201ENST00000511202 716 ntBASIC5.07□□□□□ -1.6
SMARCA2P51531 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.07□□□□□ -1.6
SMARCA2P51531 RNA5SP217-201ENST00000515959 91 ntBASIC5.07□□□□□ -1.6
SMARCA2P51531 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.07□□□□□ -1.6
SMARCA2P51531 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
SMARCA2P51531 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SMARCA2P51531 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SMARCA2P51531 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SMARCA2P51531 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC5.06□□□□□ -1.6
SMARCA2P51531 RPL7P26-201ENST00000333817 754 ntBASIC5.06□□□□□ -1.6
SMARCA2P51531 AL365396.1-201ENST00000430854 671 ntBASIC5.06□□□□□ -1.6
SMARCA2P51531 FAM172BP-201ENST00000487497 1089 ntBASIC5.06□□□□□ -1.6
SMARCA2P51531 OR5H3P-201ENST00000502817 919 ntBASIC5.06□□□□□ -1.6
SMARCA2P51531 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
SMARCA2P51531 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SMARCA2P51531 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.05□□□□□ -1.6
SMARCA2P51531 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SMARCA2P51531 RNA5SP68-201ENST00000363885 119 ntBASIC5.05□□□□□ -1.6
SMARCA2P51531 AC013470.3-201ENST00000420252 1194 ntBASIC5.05□□□□□ -1.6
SMARCA2P51531 AP002770.2-201ENST00000543613 532 ntBASIC5.05□□□□□ -1.6
SMARCA2P51531 SNORD53-201ENST00000579969 78 ntBASIC5.05□□□□□ -1.6
SMARCA2P51531 IGKV1OR2-6-201ENST00000603485 277 ntBASIC5.05□□□□□ -1.6
SMARCA2P51531 MTCO1P9-201ENST00000505577 1534 ntBASIC5.05□□□□□ -1.6
SMARCA2P51531 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC5.05□□□□□ -1.6
SMARCA2P51531 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC5.05□□□□□ -1.6
SMARCA2P51531 AL162389.1-201ENST00000449233 177 ntBASIC5.04□□□□□ -1.6
SMARCA2P51531 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.04□□□□□ -1.6
SMARCA2P51531 AC104027.1-201ENST00000521887 300 ntBASIC5.04□□□□□ -1.6
SMARCA2P51531 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC5.04□□□□□ -1.6
SMARCA2P51531 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.04□□□□□ -1.6
SMARCA2P51531 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.04□□□□□ -1.6
SMARCA2P51531 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC5.04□□□□□ -1.6
SMARCA2P51531 AC092079.1-201ENST00000558620 1985 ntBASIC5.04□□□□□ -1.6
SMARCA2P51531 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SMARCA2P51531 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.04□□□□□ -1.6
SMARCA2P51531 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SMARCA2P51531 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.04□□□□□ -1.6
SMARCA2P51531 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SMARCA2P51531 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SMARCA2P51531 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC5.04□□□□□ -1.6
SMARCA2P51531 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.04□□□□□ -1.6
SMARCA2P51531 ST13P14-201ENST00000474095 734 ntBASIC5.04□□□□□ -1.6
SMARCA2P51531 AC108210.2-201ENST00000503681 201 ntBASIC5.04□□□□□ -1.6
SMARCA2P51531 MTCYBP19-201ENST00000517463 1124 ntBASIC5.04□□□□□ -1.6
SMARCA2P51531 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.04□□□□□ -1.6
SMARCA2P51531 AC027176.1-201ENST00000560204 514 ntBASIC5.04□□□□□ -1.6
SMARCA2P51531 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.04□□□□□ -1.6
SMARCA2P51531 AC078899.5-201ENST00000612475 178 ntBASIC5.04□□□□□ -1.6
SMARCA2P51531 AP003499.2-201ENST00000624100 483 ntBASIC5.04□□□□□ -1.6
SMARCA2P51531 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SMARCA2P51531 AC092881.1-201ENST00000638218 2733 ntBASIC5.03□□□□□ -1.6
SMARCA2P51531 AL049555.1-201ENST00000562834 1933 ntBASIC5.03□□□□□ -1.6
SMARCA2P51531 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.03□□□□□ -1.6
SMARCA2P51531 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC5.03□□□□□ -1.6
SMARCA2P51531 PPIAP17-201ENST00000438507 471 ntBASIC5.03□□□□□ -1.6
SMARCA2P51531 AC008126.1-201ENST00000549019 480 ntBASIC5.03□□□□□ -1.6
SMARCA2P51531 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SMARCA2P51531 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms