Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AMD1P2-201ENST00000412936 992 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 MTATP6P20-201ENST00000414147 562 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.97□□□□□ -1.77
HNF4AP41235 USP9YP21-201ENST00000420603 432 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 FNDC3CP-201ENST00000420795 1155 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.97□□□□□ -1.77
HNF4AP41235 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.97□□□□□ -1.77
HNF4AP41235 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.97□□□□□ -1.77
HNF4AP41235 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.97□□□□□ -1.77
HNF4AP41235 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.97□□□□□ -1.77
HNF4AP41235 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.97□□□□□ -1.77
HNF4AP41235 AL358794.1-201ENST00000445689 381 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 HMGB3P22-202ENST00000451823 572 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.97□□□□□ -1.77
HNF4AP41235 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.97□□□□□ -1.77
HNF4AP41235 snoU13.24-201ENST00000458998 104 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 RPS23P7-201ENST00000466210 444 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 AC010285.1-201ENST00000470580 392 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 AL136126.1-201ENST00000473603 402 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 CEACAMP10-202ENST00000495431 496 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 AC026414.1-201ENST00000504046 698 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 AC113420.1-201ENST00000507903 571 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 AC093824.1-201ENST00000508796 343 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HNF4AP41235 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HNF4AP41235 MIR2114-201ENST00000516645 80 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 RNU7-143P-201ENST00000516781 65 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.97□□□□□ -1.77
HNF4AP41235 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.97□□□□□ -1.77
HNF4AP41235 MRPL49P2-201ENST00000521066 465 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 MED28P5-201ENST00000528254 438 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.97□□□□□ -1.77
HNF4AP41235 AC007599.1-201ENST00000568688 1174 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 RPL23AP87-202ENST00000573039 466 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 MIR4666A-201ENST00000580160 79 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 AC012417.1-201ENST00000582307 1039 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 VN1R87P-201ENST00000596706 487 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HNF4AP41235 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.97□□□□□ -1.77
HNF4AP41235 AC079395.3-201ENST00000615161 484 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 AC006386.1-201ENST00000619436 415 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 AC092184.1-201ENST00000625042 715 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 AC139713.2-210ENST00000641741 992 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HNF4AP41235 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.97□□□□□ -1.77
HNF4AP41235 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HNF4AP41235 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
HNF4AP41235 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
HNF4AP41235 ZNF962P-201ENST00000443465 3140 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.97□□□□□ -1.77
HNF4AP41235 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
HNF4AP41235 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.77
HNF4AP41235 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
HNF4AP41235 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.96□□□□□ -1.77
HNF4AP41235 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
HNF4AP41235 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HNF4AP41235 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
HNF4AP41235 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
HNF4AP41235 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HNF4AP41235 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HNF4AP41235 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HNF4AP41235 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HNF4AP41235 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HNF4AP41235 SNORA60-201ENST00000362396 134 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 RNU6-989P-201ENST00000362756 107 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
HNF4AP41235 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.96□□□□□ -1.78
HNF4AP41235 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
HNF4AP41235 RNU6-821P-201ENST00000390995 107 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 SNORA3C-201ENST00000408792 125 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 RNU6-575P-201ENST00000411326 105 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 AC092638.1-201ENST00000411966 1275 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 MTCO3P12-201ENST00000416718 547 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 VPS26BP1-201ENST00000417155 755 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 AL449283.1-202ENST00000418249 604 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 AC006011.1-201ENST00000442758 349 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 MTND1P31-201ENST00000449206 961 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 CFTRP1-201ENST00000456646 183 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 HMGN2P16-201ENST00000456802 261 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 AC010301.1-201ENST00000473936 355 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
HNF4AP41235 AC021146.5-201ENST00000503544 545 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.96□□□□□ -1.78
HNF4AP41235 RN7SKP287-201ENST00000516546 266 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 RNU6-885P-201ENST00000516607 104 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 SNORA31.20-201ENST00000517111 133 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 RN7SKP289-201ENST00000517244 295 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.96□□□□□ -1.78
HNF4AP41235 OR10V3P-201ENST00000525712 725 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.96□□□□□ -1.78
HNF4AP41235 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.96□□□□□ -1.78
HNF4AP41235 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.96□□□□□ -1.78
HNF4AP41235 AC090888.2-201ENST00000559765 1144 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.96□□□□□ -1.78
HNF4AP41235 AC079171.1-201ENST00000568788 914 ntBASIC3.96□□□□□ -1.78
HNF4AP41235 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms