Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.98□□□□□ -1.61
COL15A1P39059 BMS1P3-201ENST00000372011 932 ntBASIC4.98□□□□□ -1.61
COL15A1P39059 MIR483-201ENST00000385070 76 ntBASIC4.98□□□□□ -1.61
COL15A1P39059 MIR1302-8-201ENST00000408342 128 ntBASIC4.98□□□□□ -1.61
COL15A1P39059 SNORA3.3-201ENST00000408712 125 ntBASIC4.98□□□□□ -1.61
COL15A1P39059 SETP15-201ENST00000412724 337 ntBASIC4.98□□□□□ -1.61
COL15A1P39059 AC234782.4-201ENST00000417646 1048 ntBASIC4.98□□□□□ -1.61
COL15A1P39059 OR6C64P-201ENST00000419708 825 ntBASIC4.98□□□□□ -1.61
COL15A1P39059 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.98□□□□□ -1.61
COL15A1P39059 USP9YP26-201ENST00000421008 661 ntBASIC4.98□□□□□ -1.61
COL15A1P39059 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.98□□□□□ -1.61
COL15A1P39059 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.98□□□□□ -1.61
COL15A1P39059 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.98□□□□□ -1.61
COL15A1P39059 AL354941.1-201ENST00000438600 464 ntBASIC4.98□□□□□ -1.61
COL15A1P39059 AC092393.1-201ENST00000439625 742 ntBASIC4.98□□□□□ -1.61
COL15A1P39059 MTND5P2-201ENST00000442927 1142 ntBASIC4.98□□□□□ -1.61
COL15A1P39059 RPS3AP12-201ENST00000443616 753 ntBASIC4.98□□□□□ -1.61
COL15A1P39059 RSL24D1P3-201ENST00000449255 495 ntBASIC4.98□□□□□ -1.61
COL15A1P39059 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.98□□□□□ -1.61
COL15A1P39059 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.98□□□□□ -1.61
COL15A1P39059 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.98□□□□□ -1.61
COL15A1P39059 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL15A1P39059 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.98□□□□□ -1.61
COL15A1P39059 HIGD1AP17-201ENST00000554576 276 ntBASIC4.98□□□□□ -1.61
COL15A1P39059 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.98□□□□□ -1.61
COL15A1P39059 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.98□□□□□ -1.61
COL15A1P39059 AC022069.1-201ENST00000582910 658 ntBASIC4.98□□□□□ -1.61
COL15A1P39059 AC040904.1-201ENST00000590850 223 ntBASIC4.98□□□□□ -1.61
COL15A1P39059 AC006539.2-201ENST00000601729 572 ntBASIC4.98□□□□□ -1.61
COL15A1P39059 AF131215.7-201ENST00000602443 707 ntBASIC4.98□□□□□ -1.61
COL15A1P39059 AL451074.6-201ENST00000608512 729 ntBASIC4.98□□□□□ -1.61
COL15A1P39059 U6.105-201ENST00000637379 88 ntBASIC4.98□□□□□ -1.61
COL15A1P39059 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.98□□□□□ -1.61
COL15A1P39059 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.98□□□□□ -1.61
COL15A1P39059 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL15A1P39059 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL15A1P39059 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COL15A1P39059 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
COL15A1P39059 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
COL15A1P39059 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.98□□□□□ -1.61
COL15A1P39059 AC009229.4-201ENST00000623854 1947 ntBASIC4.97□□□□□ -1.61
COL15A1P39059 AC092079.1-201ENST00000558620 1985 ntBASIC4.97□□□□□ -1.61
COL15A1P39059 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.97□□□□□ -1.61
COL15A1P39059 RNU5A-2P-201ENST00000384337 116 ntBASIC4.97□□□□□ -1.61
COL15A1P39059 SNORD65.1-201ENST00000390889 71 ntBASIC4.97□□□□□ -1.61
COL15A1P39059 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.97□□□□□ -1.61
COL15A1P39059 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.97□□□□□ -1.61
COL15A1P39059 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.97□□□□□ -1.61
COL15A1P39059 AP000907.1-201ENST00000428428 510 ntBASIC4.97□□□□□ -1.61
COL15A1P39059 AC093155.1-201ENST00000440164 826 ntBASIC4.97□□□□□ -1.61
COL15A1P39059 TPMTP4-201ENST00000450749 678 ntBASIC4.97□□□□□ -1.61
COL15A1P39059 EIF4A1P11-201ENST00000451239 222 ntBASIC4.97□□□□□ -1.61
COL15A1P39059 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.97□□□□□ -1.61
COL15A1P39059 PNPLA4P1-201ENST00000458328 305 ntBASIC4.97□□□□□ -1.61
COL15A1P39059 RNU7-125P-201ENST00000458760 62 ntBASIC4.97□□□□□ -1.61
COL15A1P39059 MTND6P6-201ENST00000478031 263 ntBASIC4.97□□□□□ -1.61
COL15A1P39059 AC126121.1-201ENST00000482313 553 ntBASIC4.97□□□□□ -1.61
COL15A1P39059 LINC00888-204ENST00000487386 421 ntBASIC4.97□□□□□ -1.61
COL15A1P39059 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
COL15A1P39059 AC104619.4-201ENST00000510773 249 ntBASIC4.97□□□□□ -1.61
COL15A1P39059 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COL15A1P39059 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.97□□□□□ -1.61
COL15A1P39059 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.97□□□□□ -1.61
COL15A1P39059 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.97□□□□□ -1.61
COL15A1P39059 AC026368.1-201ENST00000614934 690 ntBASIC4.97□□□□□ -1.61
COL15A1P39059 MIR4278-201ENST00000636094 69 ntBASIC4.97□□□□□ -1.61
COL15A1P39059 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.97□□□□□ -1.61
COL15A1P39059 AC005539.1-201ENST00000443768 1479 ntBASIC4.97□□□□□ -1.61
COL15A1P39059 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL15A1P39059 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.97□□□□□ -1.61
COL15A1P39059 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.97□□□□□ -1.61
COL15A1P39059 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
COL15A1P39059 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL15A1P39059 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL15A1P39059 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL15A1P39059 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL15A1P39059 SGO1P2-201ENST00000429458 1589 ntBASIC4.96□□□□□ -1.62
COL15A1P39059 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
COL15A1P39059 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.96□□□□□ -1.62
COL15A1P39059 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL15A1P39059 MIR199A2-201ENST00000385289 110 ntBASIC4.96□□□□□ -1.62
COL15A1P39059 SNORA3C-201ENST00000408792 125 ntBASIC4.96□□□□□ -1.62
COL15A1P39059 RNU6-757P-201ENST00000410334 100 ntBASIC4.96□□□□□ -1.62
COL15A1P39059 RPS29P4-201ENST00000414733 161 ntBASIC4.96□□□□□ -1.62
COL15A1P39059 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.96□□□□□ -1.62
COL15A1P39059 RPS26P47-201ENST00000427219 348 ntBASIC4.96□□□□□ -1.62
COL15A1P39059 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL15A1P39059 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
COL15A1P39059 ELOCP10-201ENST00000440624 327 ntBASIC4.96□□□□□ -1.62
COL15A1P39059 MTCO2P25-201ENST00000447065 681 ntBASIC4.96□□□□□ -1.62
COL15A1P39059 PRDX3P3-201ENST00000447765 522 ntBASIC4.96□□□□□ -1.62
COL15A1P39059 AL109741.2-201ENST00000455561 343 ntBASIC4.96□□□□□ -1.62
COL15A1P39059 RNU6-1218P-201ENST00000458990 108 ntBASIC4.96□□□□□ -1.62
COL15A1P39059 SNORA59A-201ENST00000459326 152 ntBASIC4.96□□□□□ -1.62
COL15A1P39059 PLGLA-201ENST00000465668 449 ntBASIC4.96□□□□□ -1.62
COL15A1P39059 CCDC75P1-201ENST00000469247 791 ntBASIC4.96□□□□□ -1.62
COL15A1P39059 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.96□□□□□ -1.62
COL15A1P39059 WBP1LP4-201ENST00000505043 344 ntBASIC4.96□□□□□ -1.62
COL15A1P39059 AC109445.1-201ENST00000512356 383 ntBASIC4.96□□□□□ -1.62
COL15A1P39059 IGKV2-38-201ENST00000517443 247 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms