Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
NR4A1P22736 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NR4A1P22736 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.63□□□□□ -1.67
NR4A1P22736 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
NR4A1P22736 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
NR4A1P22736 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
NR4A1P22736 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NR4A1P22736 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.63□□□□□ -1.67
NR4A1P22736 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
NR4A1P22736 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.63□□□□□ -1.67
NR4A1P22736 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.63□□□□□ -1.67
NR4A1P22736 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.63□□□□□ -1.67
NR4A1P22736 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.63□□□□□ -1.67
NR4A1P22736 RNU6-483P-201ENST00000384088 108 ntBASIC4.63□□□□□ -1.67
NR4A1P22736 Y_RNA.481-201ENST00000384373 102 ntBASIC4.63□□□□□ -1.67
NR4A1P22736 SNORA67-201ENST00000384423 137 ntBASIC4.63□□□□□ -1.67
NR4A1P22736 RPL31P1-201ENST00000398116 372 ntBASIC4.63□□□□□ -1.67
NR4A1P22736 AL049693.1-201ENST00000402760 611 ntBASIC4.63□□□□□ -1.67
NR4A1P22736 MIR320C1-201ENST00000408566 88 ntBASIC4.63□□□□□ -1.67
NR4A1P22736 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.63□□□□□ -1.67
NR4A1P22736 AC093655.2-201ENST00000425735 631 ntBASIC4.63□□□□□ -1.67
NR4A1P22736 MTND5P14-201ENST00000441481 1267 ntBASIC4.63□□□□□ -1.67
NR4A1P22736 Z82190.1-201ENST00000454534 490 ntBASIC4.63□□□□□ -1.67
NR4A1P22736 RPL38P1-201ENST00000460914 211 ntBASIC4.63□□□□□ -1.67
NR4A1P22736 RPS4XP1-201ENST00000482189 787 ntBASIC4.63□□□□□ -1.67
NR4A1P22736 UBA52P7-201ENST00000486088 380 ntBASIC4.63□□□□□ -1.67
NR4A1P22736 RN7SL214P-201ENST00000487317 265 ntBASIC4.63□□□□□ -1.67
NR4A1P22736 AC007182.2-201ENST00000489251 402 ntBASIC4.63□□□□□ -1.67
NR4A1P22736 RPS4XP14-201ENST00000493072 781 ntBASIC4.63□□□□□ -1.67
NR4A1P22736 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.63□□□□□ -1.67
NR4A1P22736 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.63□□□□□ -1.67
NR4A1P22736 Y_RNA.704-201ENST00000516851 102 ntBASIC4.63□□□□□ -1.67
NR4A1P22736 RNA5SP34-201ENST00000516887 130 ntBASIC4.63□□□□□ -1.67
NR4A1P22736 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.63□□□□□ -1.67
NR4A1P22736 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.63□□□□□ -1.67
NR4A1P22736 IGLV2-28-201ENST00000520681 304 ntBASIC4.63□□□□□ -1.67
NR4A1P22736 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.63□□□□□ -1.67
NR4A1P22736 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.63□□□□□ -1.67
NR4A1P22736 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.63□□□□□ -1.67
NR4A1P22736 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
NR4A1P22736 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
NR4A1P22736 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.63□□□□□ -1.67
NR4A1P22736 CYCSP40-201ENST00000575927 294 ntBASIC4.63□□□□□ -1.67
NR4A1P22736 TPMTP1-201ENST00000592307 737 ntBASIC4.63□□□□□ -1.67
NR4A1P22736 RNF138P2-201ENST00000603490 592 ntBASIC4.63□□□□□ -1.67
NR4A1P22736 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.63□□□□□ -1.67
NR4A1P22736 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.63□□□□□ -1.67
NR4A1P22736 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.63□□□□□ -1.67
NR4A1P22736 AC009233.1-201ENST00000616477 371 ntBASIC4.63□□□□□ -1.67
NR4A1P22736 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.63□□□□□ -1.67
NR4A1P22736 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.63□□□□□ -1.67
NR4A1P22736 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.63□□□□□ -1.67
NR4A1P22736 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NR4A1P22736 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NR4A1P22736 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.63□□□□□ -1.67
NR4A1P22736 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NR4A1P22736 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
NR4A1P22736 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
NR4A1P22736 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NR4A1P22736 AC107068.1-201ENST00000563286 4218 ntBASIC4.63□□□□□ -1.67
NR4A1P22736 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.63□□□□□ -1.67
NR4A1P22736 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
NR4A1P22736 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NR4A1P22736 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.62□□□□□ -1.67
NR4A1P22736 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.62□□□□□ -1.67
NR4A1P22736 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
NR4A1P22736 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.62□□□□□ -1.67
NR4A1P22736 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
NR4A1P22736 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
NR4A1P22736 SNORD56.2-201ENST00000363242 71 ntBASIC4.62□□□□□ -1.67
NR4A1P22736 U8.3-201ENST00000363321 132 ntBASIC4.62□□□□□ -1.67
NR4A1P22736 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
NR4A1P22736 MIR223-201ENST00000385204 110 ntBASIC4.62□□□□□ -1.67
NR4A1P22736 RNU1-149P-201ENST00000390870 161 ntBASIC4.62□□□□□ -1.67
NR4A1P22736 SNRPEP2-201ENST00000397592 279 ntBASIC4.62□□□□□ -1.67
NR4A1P22736 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.62□□□□□ -1.67
NR4A1P22736 EEF1A1P40-201ENST00000412883 573 ntBASIC4.62□□□□□ -1.67
NR4A1P22736 AMD1P2-201ENST00000412936 992 ntBASIC4.62□□□□□ -1.67
NR4A1P22736 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.62□□□□□ -1.67
NR4A1P22736 SPA17P1-201ENST00000416656 452 ntBASIC4.62□□□□□ -1.67
NR4A1P22736 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.62□□□□□ -1.67
NR4A1P22736 HMGB3P20-201ENST00000417997 600 ntBASIC4.62□□□□□ -1.67
NR4A1P22736 USP9YP20-201ENST00000419224 558 ntBASIC4.62□□□□□ -1.67
NR4A1P22736 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.62□□□□□ -1.67
NR4A1P22736 BX510359.3-201ENST00000422168 306 ntBASIC4.62□□□□□ -1.67
NR4A1P22736 USP9YP36-201ENST00000424581 829 ntBASIC4.62□□□□□ -1.67
NR4A1P22736 FABP7P2-201ENST00000429946 379 ntBASIC4.62□□□□□ -1.67
NR4A1P22736 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.62□□□□□ -1.67
NR4A1P22736 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.62□□□□□ -1.67
NR4A1P22736 LSM1P1-201ENST00000438629 273 ntBASIC4.62□□□□□ -1.67
NR4A1P22736 AC079448.1-201ENST00000449377 373 ntBASIC4.62□□□□□ -1.67
NR4A1P22736 SNRPGP6-201ENST00000451124 220 ntBASIC4.62□□□□□ -1.67
NR4A1P22736 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.62□□□□□ -1.67
NR4A1P22736 C1DP4-201ENST00000455429 424 ntBASIC4.62□□□□□ -1.67
NR4A1P22736 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.62□□□□□ -1.67
NR4A1P22736 OR6K1P-201ENST00000456766 971 ntBASIC4.62□□□□□ -1.67
NR4A1P22736 RPL23AP12-201ENST00000467573 473 ntBASIC4.62□□□□□ -1.67
NR4A1P22736 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.62□□□□□ -1.67
NR4A1P22736 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
NR4A1P22736 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms