Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 RPL7P20-201ENST00000520308 745 ntBASIC4.66□□□□□ -1.66
CFTRP13569 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CFTRP13569 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CFTRP13569 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.65□□□□□ -1.66
CFTRP13569 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
CFTRP13569 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
CFTRP13569 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
CFTRP13569 SNORD56.3-201ENST00000363507 71 ntBASIC4.65□□□□□ -1.66
CFTRP13569 SNORA46-201ENST00000384762 135 ntBASIC4.65□□□□□ -1.66
CFTRP13569 RPL31P1-201ENST00000398116 372 ntBASIC4.65□□□□□ -1.66
CFTRP13569 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.65□□□□□ -1.66
CFTRP13569 AC099063.2-201ENST00000446360 662 ntBASIC4.65□□□□□ -1.66
CFTRP13569 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CFTRP13569 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.65□□□□□ -1.66
CFTRP13569 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.65□□□□□ -1.66
CFTRP13569 AL365503.1-201ENST00000605247 905 ntBASIC4.65□□□□□ -1.66
CFTRP13569 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.65□□□□□ -1.66
CFTRP13569 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.65□□□□□ -1.66
CFTRP13569 RMST_9.1-201ENST00000619945 193 ntBASIC4.65□□□□□ -1.66
CFTRP13569 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CFTRP13569 AC092593.1-201ENST00000515413 1815 ntBASIC4.64□□□□□ -1.67
CFTRP13569 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CFTRP13569 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CFTRP13569 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.64□□□□□ -1.67
CFTRP13569 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
CFTRP13569 RPL23AP31-201ENST00000456160 467 ntBASIC4.64□□□□□ -1.67
CFTRP13569 AC021146.1-201ENST00000511202 716 ntBASIC4.64□□□□□ -1.67
CFTRP13569 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CFTRP13569 AC090312.2-201ENST00000582687 378 ntBASIC4.64□□□□□ -1.67
CFTRP13569 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.64□□□□□ -1.67
CFTRP13569 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC4.64□□□□□ -1.67
CFTRP13569 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CFTRP13569 NEAT1-202ENST00000501122 22743 ntBASIC4.64□□□□□ -1.67
CFTRP13569 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CFTRP13569 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CFTRP13569 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CFTRP13569 RNU1-35P-201ENST00000362782 153 ntBASIC4.63□□□□□ -1.67
CFTRP13569 MIR512-1-201ENST00000384913 84 ntBASIC4.63□□□□□ -1.67
CFTRP13569 UBE2D3P1-201ENST00000436669 444 ntBASIC4.63□□□□□ -1.67
CFTRP13569 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.63□□□□□ -1.67
CFTRP13569 RPL23AP15-201ENST00000450202 459 ntBASIC4.63□□□□□ -1.67
CFTRP13569 RPS6P4-201ENST00000494693 758 ntBASIC4.63□□□□□ -1.67
CFTRP13569 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.63□□□□□ -1.67
CFTRP13569 MIR2114-201ENST00000516645 80 ntBASIC4.63□□□□□ -1.67
CFTRP13569 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.63□□□□□ -1.67
CFTRP13569 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.63□□□□□ -1.67
CFTRP13569 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.63□□□□□ -1.67
CFTRP13569 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC4.63□□□□□ -1.67
CFTRP13569 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CFTRP13569 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.63□□□□□ -1.67
CFTRP13569 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CFTRP13569 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CFTRP13569 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CFTRP13569 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CFTRP13569 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CFTRP13569 U3.6-201ENST00000363622 211 ntBASIC4.62□□□□□ -1.67
CFTRP13569 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CFTRP13569 RPS20P22-201ENST00000473700 357 ntBASIC4.62□□□□□ -1.67
CFTRP13569 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.62□□□□□ -1.67
CFTRP13569 FAM60DP-201ENST00000524174 632 ntBASIC4.62□□□□□ -1.67
CFTRP13569 AP003102.1-201ENST00000525638 661 ntBASIC4.62□□□□□ -1.67
CFTRP13569 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.62□□□□□ -1.67
CFTRP13569 AC007424.1-203ENST00000554613 687 ntBASIC4.62□□□□□ -1.67
CFTRP13569 AC022069.1-201ENST00000582910 658 ntBASIC4.62□□□□□ -1.67
CFTRP13569 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.62□□□□□ -1.67
CFTRP13569 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.62□□□□□ -1.67
CFTRP13569 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.62□□□□□ -1.67
CFTRP13569 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CFTRP13569 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CFTRP13569 AC134882.1-201ENST00000603738 1676 ntBASIC4.62□□□□□ -1.67
CFTRP13569 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CFTRP13569 MIR26A1-201ENST00000362205 77 ntBASIC4.62□□□□□ -1.67
CFTRP13569 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CFTRP13569 RNA5SP296-201ENST00000410523 111 ntBASIC4.62□□□□□ -1.67
CFTRP13569 AC127526.1-201ENST00000417526 366 ntBASIC4.62□□□□□ -1.67
CFTRP13569 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.62□□□□□ -1.67
CFTRP13569 AC008565.1-201ENST00000509046 885 ntBASIC4.62□□□□□ -1.67
CFTRP13569 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.62□□□□□ -1.67
CFTRP13569 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
CFTRP13569 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.61□□□□□ -1.67
CFTRP13569 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CFTRP13569 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CFTRP13569 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CFTRP13569 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CFTRP13569 RNU6-618P-201ENST00000363518 112 ntBASIC4.61□□□□□ -1.67
CFTRP13569 AL513477.1-202ENST00000417061 214 ntBASIC4.61□□□□□ -1.67
CFTRP13569 AC092013.1-201ENST00000438795 332 ntBASIC4.61□□□□□ -1.67
CFTRP13569 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.61□□□□□ -1.67
CFTRP13569 AC008837.1-201ENST00000511513 412 ntBASIC4.61□□□□□ -1.67
CFTRP13569 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.61□□□□□ -1.67
CFTRP13569 AC007621.1-201ENST00000604544 437 ntBASIC4.61□□□□□ -1.67
CFTRP13569 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CFTRP13569 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.61□□□□□ -1.67
CFTRP13569 AC010338.1-201ENST00000621823 717 ntBASIC4.61□□□□□ -1.67
CFTRP13569 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.61□□□□□ -1.67
CFTRP13569 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
CFTRP13569 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CFTRP13569 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CFTRP13569 RNU6ATAC37P-201ENST00000408328 131 ntBASIC4.6□□□□□ -1.67
CFTRP13569 Z98742.3-201ENST00000418637 326 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms