Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 SNORA31.20-201ENST00000517111 133 ntBASIC3.14□□□□□ -1.91
UBCP0CG48 MIR2116-201ENST00000517221 80 ntBASIC3.14□□□□□ -1.91
UBCP0CG48 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.14□□□□□ -1.91
UBCP0CG48 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.14□□□□□ -1.91
UBCP0CG48 AP006245.1-201ENST00000522549 120 ntBASIC3.14□□□□□ -1.91
UBCP0CG48 OR4A45P-201ENST00000529954 901 ntBASIC3.14□□□□□ -1.91
UBCP0CG48 AC004217.3-201ENST00000551552 878 ntBASIC3.14□□□□□ -1.91
UBCP0CG48 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.14□□□□□ -1.91
UBCP0CG48 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.14□□□□□ -1.91
UBCP0CG48 AC022069.1-201ENST00000582910 658 ntBASIC3.14□□□□□ -1.91
UBCP0CG48 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.14□□□□□ -1.91
UBCP0CG48 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.14□□□□□ -1.91
UBCP0CG48 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.14□□□□□ -1.91
UBCP0CG48 BNIP3P4-201ENST00000604946 565 ntBASIC3.14□□□□□ -1.91
UBCP0CG48 AC016542.1-201ENST00000608259 493 ntBASIC3.14□□□□□ -1.91
UBCP0CG48 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
UBCP0CG48 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
UBCP0CG48 AC022149.2-201ENST00000621061 203 ntBASIC3.14□□□□□ -1.91
UBCP0CG48 AC073055.1-201ENST00000456901 1621 ntBASIC3.14□□□□□ -1.91
UBCP0CG48 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.14□□□□□ -1.91
UBCP0CG48 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
UBCP0CG48 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.14□□□□□ -1.91
UBCP0CG48 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
UBCP0CG48 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.14□□□□□ -1.91
UBCP0CG48 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.13□□□□□ -1.91
UBCP0CG48 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
UBCP0CG48 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.13□□□□□ -1.91
UBCP0CG48 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
UBCP0CG48 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
UBCP0CG48 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
UBCP0CG48 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
UBCP0CG48 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
UBCP0CG48 MIR525-201ENST00000384978 85 ntBASIC3.13□□□□□ -1.91
UBCP0CG48 SNORA48.8-201ENST00000391324 134 ntBASIC3.13□□□□□ -1.91
UBCP0CG48 RNA5SP129-201ENST00000410276 118 ntBASIC3.13□□□□□ -1.91
UBCP0CG48 AC068533.1-201ENST00000418542 415 ntBASIC3.13□□□□□ -1.91
UBCP0CG48 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.13□□□□□ -1.91
UBCP0CG48 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.13□□□□□ -1.91
UBCP0CG48 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.13□□□□□ -1.91
UBCP0CG48 AL645931.1-201ENST00000439737 410 ntBASIC3.13□□□□□ -1.91
UBCP0CG48 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.13□□□□□ -1.91
UBCP0CG48 SSXP4-201ENST00000451349 245 ntBASIC3.13□□□□□ -1.91
UBCP0CG48 NECAP1P2-201ENST00000455668 727 ntBASIC3.13□□□□□ -1.91
UBCP0CG48 RN7SL594P-201ENST00000470590 287 ntBASIC3.13□□□□□ -1.91
UBCP0CG48 AC026979.1-201ENST00000492525 396 ntBASIC3.13□□□□□ -1.91
UBCP0CG48 FCF1P3-201ENST00000496394 590 ntBASIC3.13□□□□□ -1.91
UBCP0CG48 AC020893.1-201ENST00000502452 580 ntBASIC3.13□□□□□ -1.91
UBCP0CG48 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.13□□□□□ -1.91
UBCP0CG48 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.13□□□□□ -1.91
UBCP0CG48 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.13□□□□□ -1.91
UBCP0CG48 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.13□□□□□ -1.91
UBCP0CG48 OR8K4P-201ENST00000534608 872 ntBASIC3.13□□□□□ -1.91
UBCP0CG48 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.13□□□□□ -1.91
UBCP0CG48 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.13□□□□□ -1.91
UBCP0CG48 TRAV37-201ENST00000553906 342 ntBASIC3.13□□□□□ -1.91
UBCP0CG48 AL163153.1-201ENST00000554223 283 ntBASIC3.13□□□□□ -1.91
UBCP0CG48 AC106734.1-201ENST00000568646 663 ntBASIC3.13□□□□□ -1.91
UBCP0CG48 MIR4474-201ENST00000579189 78 ntBASIC3.13□□□□□ -1.91
UBCP0CG48 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
UBCP0CG48 AL354798.1-201ENST00000622505 329 ntBASIC3.13□□□□□ -1.91
UBCP0CG48 AC110801.1-201ENST00000623590 212 ntBASIC3.13□□□□□ -1.91
UBCP0CG48 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.13□□□□□ -1.91
UBCP0CG48 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.13□□□□□ -1.91
UBCP0CG48 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.13□□□□□ -1.91
UBCP0CG48 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
UBCP0CG48 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
UBCP0CG48 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.12□□□□□ -1.91
UBCP0CG48 AC007656.2-201ENST00000624902 4547 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBCP0CG48 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBCP0CG48 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
UBCP0CG48 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
UBCP0CG48 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
UBCP0CG48 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.12□□□□□ -1.91
UBCP0CG48 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 MIR372-201ENST00000362225 67 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
UBCP0CG48 DEFB109C-201ENST00000382575 264 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 DEFB109B-201ENST00000382656 264 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 RNU6-339P-201ENST00000384310 107 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 RNU6-441P-201ENST00000384545 106 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 AL049693.1-201ENST00000402760 611 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 ATF1P1-201ENST00000406040 927 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
UBCP0CG48 RNU6-77P-201ENST00000410554 91 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 RNU6-628P-201ENST00000410675 107 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.12□□□□□ -1.91
UBCP0CG48 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.12□□□□□ -1.91
UBCP0CG48 COX6CP17-201ENST00000421389 185 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.12□□□□□ -1.91
UBCP0CG48 SDCBPP2-201ENST00000424643 885 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 HMGN2P20-201ENST00000437531 273 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.12□□□□□ -1.91
UBCP0CG48 AC092170.1-201ENST00000440211 356 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 MTND2P3-201ENST00000452458 470 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
UBCP0CG48 HMGN3P1-201ENST00000453847 193 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 AL133162.1-201ENST00000463228 453 ntBASIC3.12□□□□□ -1.91
UBCP0CG48 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.12□□□□□ -1.91
UBCP0CG48 AC084357.1-201ENST00000473404 255 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms