Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AL360219.1-201ENST00000610230 366 ntBASIC3.84□□□□□ -1.79
CLPTM1O96005 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLPTM1O96005 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.84□□□□□ -1.79
CLPTM1O96005 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CLPTM1O96005 AC026422.1-201ENST00000623961 452 ntBASIC3.84□□□□□ -1.79
CLPTM1O96005 AP005264.7-201ENST00000625003 745 ntBASIC3.84□□□□□ -1.79
CLPTM1O96005 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLPTM1O96005 AC109315.1-201ENST00000584143 1347 ntBASIC3.84□□□□□ -1.79
CLPTM1O96005 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.84□□□□□ -1.8
CLPTM1O96005 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CLPTM1O96005 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLPTM1O96005 AC125257.1-201ENST00000560400 2930 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLPTM1O96005 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLPTM1O96005 OTUD4P1-201ENST00000237841 3067 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 USP8P1-201ENST00000494673 3183 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.83□□□□□ -1.8
CLPTM1O96005 RNU6-560P-201ENST00000364007 108 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.83□□□□□ -1.8
CLPTM1O96005 Y_RNA.408-201ENST00000383987 102 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 MIR217-201ENST00000384817 110 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 MIR141-201ENST00000384975 95 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 RNU6-328P-201ENST00000390887 106 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 AL161909.1-201ENST00000397390 712 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 RSL24D1P4-201ENST00000400938 484 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 RNA5SP80-201ENST00000410475 111 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 ELOCP19-201ENST00000411919 318 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLPTM1O96005 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.83□□□□□ -1.8
CLPTM1O96005 AL356387.2-201ENST00000422272 243 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 RPL7P44-201ENST00000424827 742 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.83□□□□□ -1.8
CLPTM1O96005 ATP5F1P1-201ENST00000433775 569 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 SEPT7P5-201ENST00000434048 306 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.83□□□□□ -1.8
CLPTM1O96005 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.83□□□□□ -1.8
CLPTM1O96005 AC092393.1-201ENST00000439625 742 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 MTND3P1-201ENST00000441336 220 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.83□□□□□ -1.8
CLPTM1O96005 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.83□□□□□ -1.8
CLPTM1O96005 Z99714.1-201ENST00000450463 807 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.83□□□□□ -1.8
CLPTM1O96005 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.83□□□□□ -1.8
CLPTM1O96005 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CLPTM1O96005 RPL21P103-201ENST00000479921 488 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 VPS26AP1-201ENST00000483197 979 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.83□□□□□ -1.8
CLPTM1O96005 AC010486.3-201ENST00000511602 785 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.83□□□□□ -1.8
CLPTM1O96005 MRPS33P3-201ENST00000513456 322 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 RNU6-885P-201ENST00000516607 104 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.83□□□□□ -1.8
CLPTM1O96005 AC087373.1-201ENST00000524920 491 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLPTM1O96005 HIGD1AP17-201ENST00000554576 276 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 AC087465.1-201ENST00000560574 245 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.83□□□□□ -1.8
CLPTM1O96005 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.83□□□□□ -1.8
CLPTM1O96005 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.83□□□□□ -1.8
CLPTM1O96005 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.83□□□□□ -1.8
CLPTM1O96005 AL109653.1-201ENST00000603091 248 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 AP003973.1-201ENST00000604639 691 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.83□□□□□ -1.8
CLPTM1O96005 AC131235.4-201ENST00000609288 620 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 AC023158.2-201ENST00000614876 543 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 AC007546.1-201ENST00000619452 559 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.83□□□□□ -1.8
CLPTM1O96005 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.83□□□□□ -1.8
CLPTM1O96005 Z99496.1-201ENST00000469424 1477 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 AL353743.4-201ENST00000422653 1547 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
CLPTM1O96005 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLPTM1O96005 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLPTM1O96005 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CLPTM1O96005 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLPTM1O96005 AL133383.2-201ENST00000622958 2336 ntBASIC3.83□□□□□ -1.8
CLPTM1O96005 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
CLPTM1O96005 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.82□□□□□ -1.8
CLPTM1O96005 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLPTM1O96005 UBE3AP2-201ENST00000429033 2259 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLPTM1O96005 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CLPTM1O96005 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 AC126755.2-208ENST00000327792 462 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 AC138969.1-213ENST00000331436 462 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 RNU6-839P-201ENST00000363347 108 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CLPTM1O96005 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.82□□□□□ -1.8
CLPTM1O96005 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
CLPTM1O96005 AL356131.1-201ENST00000405826 414 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.82□□□□□ -1.8
CLPTM1O96005 RNU6-757P-201ENST00000410334 100 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 RNU2-37P-201ENST00000410695 177 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 RNU6-272P-201ENST00000411028 104 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.82□□□□□ -1.8
CLPTM1O96005 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.82□□□□□ -1.8
CLPTM1O96005 USP9YP26-201ENST00000421008 661 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 MRPS36P1-201ENST00000421291 307 ntBASIC3.82□□□□□ -1.8
CLPTM1O96005 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.82□□□□□ -1.8
CLPTM1O96005 USP9YP11-201ENST00000427537 717 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms