Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.71□□□□□ -1.82
MSH4O15457 AC021146.1-201ENST00000511202 716 ntBASIC3.71□□□□□ -1.82
MSH4O15457 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.71□□□□□ -1.82
MSH4O15457 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.71□□□□□ -1.82
MSH4O15457 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.71□□□□□ -1.82
MSH4O15457 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
MSH4O15457 MIR4644-201ENST00000579929 84 ntBASIC3.71□□□□□ -1.82
MSH4O15457 AC090312.2-201ENST00000582687 378 ntBASIC3.71□□□□□ -1.82
MSH4O15457 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.71□□□□□ -1.82
MSH4O15457 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.71□□□□□ -1.82
MSH4O15457 AL606834.2-201ENST00000602954 668 ntBASIC3.71□□□□□ -1.82
MSH4O15457 uc_338.1-201ENST00000612113 180 ntBASIC3.71□□□□□ -1.82
MSH4O15457 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
MSH4O15457 SNORD39.4-201ENST00000620099 78 ntBASIC3.71□□□□□ -1.82
MSH4O15457 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
MSH4O15457 MTND4P10-201ENST00000446199 1363 ntBASIC3.71□□□□□ -1.82
MSH4O15457 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
MSH4O15457 AC008432.1-201ENST00000615912 1320 ntBASIC3.7□□□□□ -1.82
MSH4O15457 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
MSH4O15457 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
MSH4O15457 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.7□□□□□ -1.82
MSH4O15457 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.7□□□□□ -1.82
MSH4O15457 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.7□□□□□ -1.82
MSH4O15457 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.7□□□□□ -1.82
MSH4O15457 ATP5F1P6-201ENST00000402768 767 ntBASIC3.7□□□□□ -1.82
MSH4O15457 RNA5SP229-201ENST00000410809 99 ntBASIC3.7□□□□□ -1.82
MSH4O15457 RHEBP3-201ENST00000411920 351 ntBASIC3.7□□□□□ -1.82
MSH4O15457 PRELID3BP11-201ENST00000414230 479 ntBASIC3.7□□□□□ -1.82
MSH4O15457 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.7□□□□□ -1.82
MSH4O15457 RPS26P40-201ENST00000435209 294 ntBASIC3.7□□□□□ -1.82
MSH4O15457 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.7□□□□□ -1.82
MSH4O15457 AC104978.1-201ENST00000449387 391 ntBASIC3.7□□□□□ -1.82
MSH4O15457 RPL7P55-201ENST00000450522 746 ntBASIC3.7□□□□□ -1.82
MSH4O15457 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.7□□□□□ -1.82
MSH4O15457 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.7□□□□□ -1.82
MSH4O15457 AC090071.1-201ENST00000507713 644 ntBASIC3.7□□□□□ -1.82
MSH4O15457 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.7□□□□□ -1.82
MSH4O15457 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.7□□□□□ -1.82
MSH4O15457 IGHV3-32-201ENST00000519182 355 ntBASIC3.7□□□□□ -1.82
MSH4O15457 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.7□□□□□ -1.82
MSH4O15457 HIGD1AP1-201ENST00000550979 275 ntBASIC3.7□□□□□ -1.82
MSH4O15457 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.7□□□□□ -1.82
MSH4O15457 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.7□□□□□ -1.82
MSH4O15457 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.7□□□□□ -1.82
MSH4O15457 ATP5F1P7-201ENST00000567330 760 ntBASIC3.7□□□□□ -1.82
MSH4O15457 MIR4425-201ENST00000580572 84 ntBASIC3.7□□□□□ -1.82
MSH4O15457 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.7□□□□□ -1.82
MSH4O15457 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.7□□□□□ -1.82
MSH4O15457 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.7□□□□□ -1.82
MSH4O15457 AL161756.2-201ENST00000604597 246 ntBASIC3.7□□□□□ -1.82
MSH4O15457 AC073657.2-201ENST00000605661 303 ntBASIC3.7□□□□□ -1.82
MSH4O15457 AC245100.7-201ENST00000609678 442 ntBASIC3.7□□□□□ -1.82
MSH4O15457 AL512506.1-201ENST00000613918 449 ntBASIC3.7□□□□□ -1.82
MSH4O15457 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.7□□□□□ -1.82
MSH4O15457 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.7□□□□□ -1.82
MSH4O15457 AC009452.1-201ENST00000640823 606 ntBASIC3.7□□□□□ -1.82
MSH4O15457 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
MSH4O15457 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
MSH4O15457 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
MSH4O15457 MFSD8-213ENST00000641134 1327 ntBASIC3.7□□□□□ -1.82
MSH4O15457 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.69□□□□□ -1.82
MSH4O15457 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
MSH4O15457 MIR423-201ENST00000362201 94 ntBASIC3.69□□□□□ -1.82
MSH4O15457 RN7SKP44-201ENST00000363602 316 ntBASIC3.69□□□□□ -1.82
MSH4O15457 SNORD56.4-201ENST00000363883 71 ntBASIC3.69□□□□□ -1.82
MSH4O15457 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.69□□□□□ -1.82
MSH4O15457 PTGES3P2-201ENST00000407942 482 ntBASIC3.69□□□□□ -1.82
MSH4O15457 RNU6-55P-201ENST00000411092 107 ntBASIC3.69□□□□□ -1.82
MSH4O15457 RNU6-954P-201ENST00000411355 107 ntBASIC3.69□□□□□ -1.82
MSH4O15457 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.69□□□□□ -1.82
MSH4O15457 AC012065.2-201ENST00000421295 375 ntBASIC3.69□□□□□ -1.82
MSH4O15457 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.69□□□□□ -1.82
MSH4O15457 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.69□□□□□ -1.82
MSH4O15457 MRPL35P4-201ENST00000453682 566 ntBASIC3.69□□□□□ -1.82
MSH4O15457 RN7SL807P-201ENST00000470923 297 ntBASIC3.69□□□□□ -1.82
MSH4O15457 AC104689.1-201ENST00000473356 768 ntBASIC3.69□□□□□ -1.82
MSH4O15457 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.69□□□□□ -1.82
MSH4O15457 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.69□□□□□ -1.82
MSH4O15457 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.69□□□□□ -1.82
MSH4O15457 RPL7L1P13-201ENST00000511702 739 ntBASIC3.69□□□□□ -1.82
MSH4O15457 AC027338.1-201ENST00000514840 825 ntBASIC3.69□□□□□ -1.82
MSH4O15457 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.69□□□□□ -1.82
MSH4O15457 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.69□□□□□ -1.82
MSH4O15457 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.69□□□□□ -1.82
MSH4O15457 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.69□□□□□ -1.82
MSH4O15457 NDUFB9P3-201ENST00000521269 501 ntBASIC3.69□□□□□ -1.82
MSH4O15457 PTP4A1P6-201ENST00000531034 478 ntBASIC3.69□□□□□ -1.82
MSH4O15457 AL442163.2-201ENST00000553912 710 ntBASIC3.69□□□□□ -1.82
MSH4O15457 AC007424.1-203ENST00000554613 687 ntBASIC3.69□□□□□ -1.82
MSH4O15457 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.69□□□□□ -1.82
MSH4O15457 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.69□□□□□ -1.82
MSH4O15457 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.69□□□□□ -1.82
MSH4O15457 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.69□□□□□ -1.82
MSH4O15457 MIR5680-201ENST00000577577 84 ntBASIC3.69□□□□□ -1.82
MSH4O15457 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.69□□□□□ -1.82
MSH4O15457 AL034351.1-201ENST00000605288 668 ntBASIC3.69□□□□□ -1.82
MSH4O15457 AC010680.4-201ENST00000605334 543 ntBASIC3.69□□□□□ -1.82
MSH4O15457 YPEL5P2-201ENST00000605553 359 ntBASIC3.69□□□□□ -1.82
MSH4O15457 RNVU1-4-201ENST00000612985 164 ntBASIC3.69□□□□□ -1.82
MSH4O15457 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms