Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC6.33□□□□□ -1.4
TMEM88BA6NKF7 AC091042.1-201ENST00000579213 173 ntBASIC6.33□□□□□ -1.4
TMEM88BA6NKF7 MIR4691-201ENST00000583764 85 ntBASIC6.33□□□□□ -1.4
TMEM88BA6NKF7 VN1R80P-201ENST00000597126 338 ntBASIC6.33□□□□□ -1.4
TMEM88BA6NKF7 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
TMEM88BA6NKF7 AL596275.2-204ENST00000641628 552 ntBASIC6.33□□□□□ -1.4
TMEM88BA6NKF7 AL596275.2-206ENST00000641957 626 ntBASIC6.33□□□□□ -1.4
TMEM88BA6NKF7 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
TMEM88BA6NKF7 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.33□□□□□ -1.4
TMEM88BA6NKF7 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
TMEM88BA6NKF7 AP005435.3-201ENST00000531260 3198 ntBASIC6.33□□□□□ -1.4
TMEM88BA6NKF7 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.33□□□□□ -1.4
TMEM88BA6NKF7 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
TMEM88BA6NKF7 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
TMEM88BA6NKF7 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 AC092070.2-203ENST00000598377 3644 ntBASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 RPS4XP5-202ENST00000449995 1334 ntBASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 RNU6-996P-201ENST00000365438 107 ntBASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 RNU4-48P-201ENST00000365559 182 ntBASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 SNORD37.1-201ENST00000390968 65 ntBASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 RNA5SP332-201ENST00000391063 115 ntBASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 RNU6-1068P-201ENST00000410958 103 ntBASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 AC007390.1-201ENST00000415722 356 ntBASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 DDX39BP1-205ENST00000422507 192 ntBASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 AC092832.1-201ENST00000422934 400 ntBASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 RPL7P12-201ENST00000446719 750 ntBASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 AL353691.1-201ENST00000451332 387 ntBASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 NANOGP10-201ENST00000453325 895 ntBASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 AC105417.1-201ENST00000514691 285 ntBASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 SNORA70.11-201ENST00000515987 138 ntBASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 SNORA70.13-201ENST00000516116 138 ntBASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 SCARNA24.1-201ENST00000516465 137 ntBASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 RNU6-1220P-201ENST00000517126 108 ntBASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 OR5BN1P-201ENST00000532955 829 ntBASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 AP005403.1-201ENST00000579720 229 ntBASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 AC044792.1-201ENST00000593294 196 ntBASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 AL451044.1-201ENST00000604867 238 ntBASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 AC002550.2-201ENST00000621246 394 ntBASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 AC079684.1-201ENST00000621405 437 ntBASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 AL138713.1-201ENST00000624026 2130 ntBASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
TMEM88BA6NKF7 AL391262.1-201ENST00000556558 1992 ntBASIC6.31□□□□□ -1.4
TMEM88BA6NKF7 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TMEM88BA6NKF7 AC133552.1-201ENST00000569988 4007 ntBASIC6.31□□□□□ -1.4
TMEM88BA6NKF7 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TMEM88BA6NKF7 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
TMEM88BA6NKF7 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TMEM88BA6NKF7 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.31□□□□□ -1.4
TMEM88BA6NKF7 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TMEM88BA6NKF7 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TMEM88BA6NKF7 SNORD51-201ENST00000384320 80 ntBASIC6.31□□□□□ -1.4
TMEM88BA6NKF7 MIR19A-201ENST00000384878 82 ntBASIC6.31□□□□□ -1.4
TMEM88BA6NKF7 MIR105-1-201ENST00000385222 81 ntBASIC6.31□□□□□ -1.4
TMEM88BA6NKF7 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
TMEM88BA6NKF7 NCOR1P3-201ENST00000420479 303 ntBASIC6.31□□□□□ -1.4
TMEM88BA6NKF7 CHIAP3-201ENST00000423668 1133 ntBASIC6.31□□□□□ -1.4
TMEM88BA6NKF7 FTH1P1-201ENST00000437933 532 ntBASIC6.31□□□□□ -1.4
TMEM88BA6NKF7 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC6.31□□□□□ -1.4
TMEM88BA6NKF7 AC011742.2-201ENST00000443818 352 ntBASIC6.31□□□□□ -1.4
TMEM88BA6NKF7 NUTF2P7-201ENST00000453086 375 ntBASIC6.31□□□□□ -1.4
TMEM88BA6NKF7 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.31□□□□□ -1.4
TMEM88BA6NKF7 AC006967.1-201ENST00000467608 589 ntBASIC6.31□□□□□ -1.4
TMEM88BA6NKF7 RN7SL41P-201ENST00000476144 297 ntBASIC6.31□□□□□ -1.4
TMEM88BA6NKF7 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms