Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 RNA5SP183-201ENST00000362452 119 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 RNA5SP258-201ENST00000362750 119 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 RNU4-44P-201ENST00000363050 141 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 Y_RNA.234-201ENST00000364409 97 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 RPL7P25-201ENST00000404151 721 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 RNU2-15P-201ENST00000410692 191 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 EIF4A1P3-201ENST00000411521 244 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 AL807761.1-201ENST00000417622 171 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 ISCA1P1-201ENST00000426679 387 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 COX6CP13-201ENST00000428703 226 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 AC019185.1-201ENST00000442718 389 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 TCEA1P1-201ENST00000449716 880 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 IGHV5-78-201ENST00000450948 295 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 AP1S2P1-201ENST00000457344 379 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 CYCSP34-201ENST00000458172 304 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 AC011005.3-201ENST00000491624 395 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 AC005798.1-201ENST00000513715 387 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 ENPP7P9-201ENST00000514456 627 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 RN7SKP99-201ENST00000517028 307 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 MTCO2P4-201ENST00000517968 247 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 MTND4LP26-201ENST00000518144 282 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 DEFB108A-201ENST00000530110 222 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 ZNF519P2-201ENST00000557032 169 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 MIR3913-1-201ENST00000577744 102 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 MIR4801-201ENST00000582704 82 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 NRBF2P1-201ENST00000587407 859 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 AC233280.2-201ENST00000603917 1070 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 U4.5-201ENST00000617137 123 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 AC073534.2-201ENST00000620377 381 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 PISRT1-201ENST00000626175 531 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 AL592437.2-201ENST00000421655 2434 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 AC091046.3-201ENST00000631455 1574 ntBASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CCM2LQ9NUG4 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 RNU6-339P-201ENST00000384310 107 ntBASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 OR8V1P-201ENST00000395193 873 ntBASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 GLULP6-201ENST00000399502 913 ntBASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 HSPA8P15-201ENST00000401676 786 ntBASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 MTND4LP20-201ENST00000402379 270 ntBASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 EIF1P1-201ENST00000421436 341 ntBASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 RPS20P24-201ENST00000457473 361 ntBASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 AC006463.2-201ENST00000473326 348 ntBASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 CEACAMP10-202ENST00000495431 496 ntBASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 OR51K1P-201ENST00000510214 950 ntBASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 AC091133.4-201ENST00000511142 308 ntBASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 HIGD1AP3-201ENST00000515857 278 ntBASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 RN7SKP244-201ENST00000516513 307 ntBASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 RNU6-506P-201ENST00000516553 94 ntBASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 RNU6-201P-201ENST00000517100 61 ntBASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 GSTP1P1-201ENST00000548078 319 ntBASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 AL157394.1-201ENST00000562983 1224 ntBASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCM2LQ9NUG4 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms