Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.72□□□□□ -1.65
VPS45Q9NRW7 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS45Q9NRW7 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS45Q9NRW7 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.72□□□□□ -1.65
VPS45Q9NRW7 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
VPS45Q9NRW7 SNORA48.10-201ENST00000516965 160 ntBASIC4.72□□□□□ -1.65
VPS45Q9NRW7 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS45Q9NRW7 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS45Q9NRW7 OR4A45P-201ENST00000529954 901 ntBASIC4.72□□□□□ -1.65
VPS45Q9NRW7 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS45Q9NRW7 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS45Q9NRW7 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS45Q9NRW7 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS45Q9NRW7 AC023161.2-201ENST00000551218 780 ntBASIC4.72□□□□□ -1.65
VPS45Q9NRW7 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS45Q9NRW7 ACTR3BP3-201ENST00000565577 979 ntBASIC4.72□□□□□ -1.65
VPS45Q9NRW7 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.72□□□□□ -1.65
VPS45Q9NRW7 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.72□□□□□ -1.65
VPS45Q9NRW7 LLPHP1-201ENST00000603571 367 ntBASIC4.72□□□□□ -1.65
VPS45Q9NRW7 AP000811.1-201ENST00000603803 651 ntBASIC4.72□□□□□ -1.65
VPS45Q9NRW7 AC091979.2-201ENST00000607514 214 ntBASIC4.72□□□□□ -1.65
VPS45Q9NRW7 AC140113.4-201ENST00000622087 222 ntBASIC4.72□□□□□ -1.65
VPS45Q9NRW7 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS45Q9NRW7 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS45Q9NRW7 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
VPS45Q9NRW7 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
VPS45Q9NRW7 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VPS45Q9NRW7 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.72□□□□□ -1.65
VPS45Q9NRW7 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS45Q9NRW7 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.72□□□□□ -1.65
VPS45Q9NRW7 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
VPS45Q9NRW7 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
VPS45Q9NRW7 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS45Q9NRW7 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS45Q9NRW7 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS45Q9NRW7 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VPS45Q9NRW7 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS45Q9NRW7 SNORA71.2-201ENST00000364941 134 ntBASIC4.71□□□□□ -1.66
VPS45Q9NRW7 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VPS45Q9NRW7 RNU6-1226P-201ENST00000384317 107 ntBASIC4.71□□□□□ -1.66
VPS45Q9NRW7 Y_RNA.560-201ENST00000384689 102 ntBASIC4.71□□□□□ -1.66
VPS45Q9NRW7 RNU6-253P-201ENST00000384730 105 ntBASIC4.71□□□□□ -1.66
VPS45Q9NRW7 MIR1250-201ENST00000408098 113 ntBASIC4.71□□□□□ -1.66
VPS45Q9NRW7 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS45Q9NRW7 AC004987.3-201ENST00000413879 771 ntBASIC4.71□□□□□ -1.66
VPS45Q9NRW7 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS45Q9NRW7 MTCO3P1-205ENST00000422088 832 ntBASIC4.71□□□□□ -1.66
VPS45Q9NRW7 RWDD4P2-201ENST00000426392 563 ntBASIC4.71□□□□□ -1.66
VPS45Q9NRW7 MTND1P20-201ENST00000430341 950 ntBASIC4.71□□□□□ -1.66
VPS45Q9NRW7 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS45Q9NRW7 AL590103.1-201ENST00000434488 307 ntBASIC4.71□□□□□ -1.66
VPS45Q9NRW7 ATP5C1P1-201ENST00000441945 895 ntBASIC4.71□□□□□ -1.66
VPS45Q9NRW7 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS45Q9NRW7 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VPS45Q9NRW7 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS45Q9NRW7 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS45Q9NRW7 RN7SL303P-201ENST00000469773 251 ntBASIC4.71□□□□□ -1.66
VPS45Q9NRW7 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS45Q9NRW7 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS45Q9NRW7 MTND4LP31-201ENST00000514859 294 ntBASIC4.71□□□□□ -1.66
VPS45Q9NRW7 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.71□□□□□ -1.66
VPS45Q9NRW7 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS45Q9NRW7 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS45Q9NRW7 MED28P5-201ENST00000528254 438 ntBASIC4.71□□□□□ -1.66
VPS45Q9NRW7 AP001781.1-201ENST00000530977 207 ntBASIC4.71□□□□□ -1.66
VPS45Q9NRW7 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.71□□□□□ -1.66
VPS45Q9NRW7 AC007954.1-201ENST00000554198 494 ntBASIC4.71□□□□□ -1.66
VPS45Q9NRW7 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS45Q9NRW7 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.71□□□□□ -1.66
VPS45Q9NRW7 MIR3138-201ENST00000585238 82 ntBASIC4.71□□□□□ -1.66
VPS45Q9NRW7 AC018714.1-201ENST00000605028 208 ntBASIC4.71□□□□□ -1.66
VPS45Q9NRW7 AC112220.3-201ENST00000605502 502 ntBASIC4.71□□□□□ -1.66
VPS45Q9NRW7 AC091946.2-201ENST00000606105 291 ntBASIC4.71□□□□□ -1.66
VPS45Q9NRW7 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
VPS45Q9NRW7 RAD17P1-201ENST00000418130 2042 ntBASIC4.71□□□□□ -1.66
VPS45Q9NRW7 NOL8P1-201ENST00000508336 3529 ntBASIC4.71□□□□□ -1.66
VPS45Q9NRW7 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.71□□□□□ -1.66
VPS45Q9NRW7 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
VPS45Q9NRW7 AC006971.1-201ENST00000407916 4486 ntBASIC4.71□□□□□ -1.66
VPS45Q9NRW7 AC107982.1-201ENST00000507171 1300 ntBASIC4.71□□□□□ -1.66
VPS45Q9NRW7 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.71□□□□□ -1.66
VPS45Q9NRW7 AC011477.1-204ENST00000623416 1325 ntBASIC4.71□□□□□ -1.66
VPS45Q9NRW7 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS45Q9NRW7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
VPS45Q9NRW7 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS45Q9NRW7 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS45Q9NRW7 NMD3P1-201ENST00000439704 1488 ntBASIC4.7□□□□□ -1.66
VPS45Q9NRW7 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS45Q9NRW7 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.7□□□□□ -1.66
VPS45Q9NRW7 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
VPS45Q9NRW7 MTND4P34-201ENST00000572715 1371 ntBASIC4.7□□□□□ -1.66
VPS45Q9NRW7 SDHCP2-201ENST00000398565 501 ntBASIC4.7□□□□□ -1.66
VPS45Q9NRW7 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS45Q9NRW7 AL023807.1-201ENST00000407932 359 ntBASIC4.7□□□□□ -1.66
VPS45Q9NRW7 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS45Q9NRW7 VDAC1P9-201ENST00000412766 841 ntBASIC4.7□□□□□ -1.66
VPS45Q9NRW7 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS45Q9NRW7 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS45Q9NRW7 EIF4EP1-201ENST00000422311 642 ntBASIC4.7□□□□□ -1.66
VPS45Q9NRW7 Z74021.1-201ENST00000423610 407 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms