Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 SF3A3P1-201ENST00000446317 1477 ntBASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 SNORA10B-201ENST00000384458 133 ntBASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 Y_RNA.542-201ENST00000384641 111 ntBASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 RPL12P23-201ENST00000405880 490 ntBASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 RPS15AP6-201ENST00000420703 385 ntBASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 RPL23AP38-201ENST00000423801 469 ntBASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 CYCSP43-201ENST00000438233 310 ntBASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 RN7SKP233-201ENST00000517005 110 ntBASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 RGS5-220ENST00000528689 566 ntTSL 5 BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 MIR6503-201ENST00000622884 86 ntBASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 SNX18P3-202ENST00000565670 1750 ntBASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCAF1Q9H7N4 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.72
SCAF1Q9H7N4 OFD1P17-201ENST00000437639 3018 ntBASIC10.52□□□□□ -0.72
SCAF1Q9H7N4 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
SCAF1Q9H7N4 AL161901.1-201ENST00000624954 3425 ntBASIC10.52□□□□□ -0.72
SCAF1Q9H7N4 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 UBE2WP1-201ENST00000362030 340 ntBASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 SMARCE1P6-201ENST00000398372 1216 ntBASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 RN7SKP261-201ENST00000410948 278 ntBASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 RPL18AP14-201ENST00000417685 526 ntBASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 PLA2G12AP2-201ENST00000424744 264 ntBASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 RPL36P19-201ENST00000430744 301 ntBASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 AL161454.1-201ENST00000446226 569 ntBASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 IGKV1OR2-2-201ENST00000451163 355 ntBASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 RPS27AP1-201ENST00000475545 471 ntBASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 RPL31P60-201ENST00000478450 367 ntBASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 FTH1P23-201ENST00000492727 550 ntBASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 IGKV1OR2-1-201ENST00000514060 354 ntBASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 CARSP2-201ENST00000520688 277 ntBASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 IGKV1OR2-118-201ENST00000603238 347 ntBASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
SCAF1Q9H7N4 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
SCAF1Q9H7N4 AC004014.2-201ENST00000623718 5122 ntBASIC10.51□□□□□ -0.73
SCAF1Q9H7N4 ZNF402P-201ENST00000404435 3100 ntBASIC10.51□□□□□ -0.73
SCAF1Q9H7N4 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
SCAF1Q9H7N4 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
SCAF1Q9H7N4 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC10.51□□□□□ -0.73
SCAF1Q9H7N4 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
SCAF1Q9H7N4 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC10.51□□□□□ -0.73
SCAF1Q9H7N4 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
SCAF1Q9H7N4 SNORA64.3-201ENST00000365647 134 ntBASIC10.51□□□□□ -0.73
SCAF1Q9H7N4 MIR1204-201ENST00000408388 67 ntBASIC10.51□□□□□ -0.73
SCAF1Q9H7N4 RN7SKP254-201ENST00000410685 310 ntBASIC10.51□□□□□ -0.73
SCAF1Q9H7N4 AC011742.1-201ENST00000431448 434 ntBASIC10.51□□□□□ -0.73
SCAF1Q9H7N4 AL136126.1-201ENST00000473603 402 ntBASIC10.51□□□□□ -0.73
SCAF1Q9H7N4 AC005840.1-201ENST00000498412 377 ntBASIC10.51□□□□□ -0.73
SCAF1Q9H7N4 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC10.51□□□□□ -0.73
SCAF1Q9H7N4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC10.51□□□□□ -0.73
SCAF1Q9H7N4 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC10.51□□□□□ -0.73
SCAF1Q9H7N4 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC10.51□□□□□ -0.73
SCAF1Q9H7N4 FKBP1BP1-201ENST00000553366 325 ntBASIC10.51□□□□□ -0.73
SCAF1Q9H7N4 CUX2P1-201ENST00000606426 298 ntBASIC10.51□□□□□ -0.73
SCAF1Q9H7N4 CR392039.3-201ENST00000623236 227 ntTSL 5 BASIC10.51□□□□□ -0.73
SCAF1Q9H7N4 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC10.51□□□□□ -0.73
SCAF1Q9H7N4 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
SCAF1Q9H7N4 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms