Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 AL450345.1-202ENST00000605741 3881 ntBASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 OR5J1P-201ENST00000313544 939 ntBASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 RNU4-1-201ENST00000363925 141 ntBASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 Y_RNA.372-201ENST00000365599 102 ntBASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 RNU6-1103P-201ENST00000384150 107 ntBASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 RNU6-821P-201ENST00000390995 107 ntBASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 RNU4-34P-201ENST00000410431 124 ntBASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 RPL35AP24-201ENST00000413846 330 ntBASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 MTCYBP24-201ENST00000420387 1106 ntBASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 AC073464.1-201ENST00000429823 534 ntBASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 ELOCP18-201ENST00000434209 337 ntBASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 CYCSP24-201ENST00000445119 316 ntBASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 RPL29P29-201ENST00000448725 423 ntBASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 AC093270.2-201ENST00000486157 792 ntBASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 AC010587.1-201ENST00000505809 469 ntBASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 ARL2BPP6-201ENST00000512757 439 ntBASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 RN7SKP116-201ENST00000516902 319 ntBASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 AP006245.2-201ENST00000522004 300 ntBASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 GSTP1P1-201ENST00000548078 319 ntBASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 SNORA59B-202ENST00000578183 701 ntBASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 AC068790.3-201ENST00000602988 553 ntBASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 AL139286.1-201ENST00000604465 483 ntBASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 IMMP1LP1-201ENST00000605170 488 ntBASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 AC007014.2-201ENST00000615581 479 ntBASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 AP001784.1-201ENST00000624107 428 ntBASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 AC091905.1-201ENST00000624400 311 ntBASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TRIM55Q9BYV6 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 AL731532.2-201ENST00000623542 1953 ntBASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 MTCO1P24-201ENST00000515438 1558 ntBASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 RNU6-114P-201ENST00000384704 105 ntBASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 AL590002.1-201ENST00000406554 418 ntBASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 TIMM9P3-201ENST00000428659 274 ntBASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 RPS27AP12-201ENST00000429552 465 ntBASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 MTND1P2-201ENST00000430604 821 ntBASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 MTCO2P11-201ENST00000431069 680 ntBASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 RPL23AP33-201ENST00000442301 452 ntBASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 MTATP6P30-201ENST00000443540 664 ntBASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 AL590399.6-201ENST00000446396 307 ntBASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 AL450023.1-201ENST00000450868 751 ntBASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 snoU109.4-201ENST00000458953 143 ntBASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 GYG1P1-201ENST00000460864 698 ntBASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 RN7SL583P-201ENST00000475692 287 ntBASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 RN7SL547P-201ENST00000490793 290 ntBASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 AC009120.1-201ENST00000493458 473 ntBASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 AL139099.1-201ENST00000497398 403 ntBASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 AC019235.1-201ENST00000503847 207 ntBASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.38□□□□□ -1.55
TRIM55Q9BYV6 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms