Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
VRK1Q99986 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
VRK1Q99986 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.59□□□□□ -1.67
VRK1Q99986 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VRK1Q99986 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.59□□□□□ -1.67
VRK1Q99986 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VRK1Q99986 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VRK1Q99986 RNA5SP183-201ENST00000362452 119 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 U8.3-201ENST00000363321 132 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 Y_RNA.234-201ENST00000364409 97 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
VRK1Q99986 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
VRK1Q99986 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.59□□□□□ -1.67
VRK1Q99986 RN7SKP213-201ENST00000410746 298 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 PABPC1P7-201ENST00000413177 1513 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.59□□□□□ -1.67
VRK1Q99986 CYCSP10-201ENST00000417973 294 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 RPL36AP36-201ENST00000418616 301 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.59□□□□□ -1.67
VRK1Q99986 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.59□□□□□ -1.67
VRK1Q99986 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.59□□□□□ -1.67
VRK1Q99986 AL353777.1-201ENST00000425552 326 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 RPS27P18-201ENST00000431701 247 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.59□□□□□ -1.67
VRK1Q99986 GAPDHP58-201ENST00000438477 1006 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.59□□□□□ -1.67
VRK1Q99986 CEACAMP7-201ENST00000444105 496 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 MRPL48P1-201ENST00000445390 636 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.59□□□□□ -1.67
VRK1Q99986 snoU13.8-201ENST00000458890 104 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
VRK1Q99986 RPS3AP17-201ENST00000472594 777 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.59□□□□□ -1.67
VRK1Q99986 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.59□□□□□ -1.67
VRK1Q99986 MTCO3P44-201ENST00000510977 541 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.59□□□□□ -1.67
VRK1Q99986 RNU2-46P-201ENST00000517038 113 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 RN7SKP234-201ENST00000517173 224 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.59□□□□□ -1.67
VRK1Q99986 AC022832.1-201ENST00000530718 645 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 PTP4A1P6-201ENST00000531034 478 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.59□□□□□ -1.67
VRK1Q99986 AC027369.5-201ENST00000533838 755 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 AP004607.2-201ENST00000533949 322 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 AC024224.1-201ENST00000538284 609 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.59□□□□□ -1.67
VRK1Q99986 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.59□□□□□ -1.67
VRK1Q99986 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.59□□□□□ -1.67
VRK1Q99986 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.59□□□□□ -1.67
VRK1Q99986 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.59□□□□□ -1.67
VRK1Q99986 MIR3691-201ENST00000578066 90 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 AC069307.1-201ENST00000602820 447 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 AC108738.1-201ENST00000603703 237 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 AL450345.1-202ENST00000605741 3881 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.59□□□□□ -1.67
VRK1Q99986 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.59□□□□□ -1.67
VRK1Q99986 AC024941.1-201ENST00000612250 334 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.59□□□□□ -1.67
VRK1Q99986 AC100757.1-201ENST00000616872 1835 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.59□□□□□ -1.67
VRK1Q99986 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.59□□□□□ -1.67
VRK1Q99986 OR5H6-203ENST00000642105 978 ntBASIC4.59□□□□□ -1.67
VRK1Q99986 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.68
VRK1Q99986 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
VRK1Q99986 AL672167.1-204ENST00000641875 3017 ntBASIC4.59□□□□□ -1.68
VRK1Q99986 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
VRK1Q99986 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
VRK1Q99986 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
VRK1Q99986 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.58□□□□□ -1.68
VRK1Q99986 LINC01109-201ENST00000603837 3081 ntBASIC4.58□□□□□ -1.68
VRK1Q99986 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.58□□□□□ -1.68
VRK1Q99986 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VRK1Q99986 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VRK1Q99986 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VRK1Q99986 U3.29-201ENST00000391296 212 ntBASIC4.58□□□□□ -1.68
VRK1Q99986 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
VRK1Q99986 AL078599.1-201ENST00000402075 293 ntBASIC4.58□□□□□ -1.68
VRK1Q99986 RNU2-15P-201ENST00000410692 191 ntBASIC4.58□□□□□ -1.68
VRK1Q99986 EIF4A1P3-201ENST00000411521 244 ntBASIC4.58□□□□□ -1.68
VRK1Q99986 AL359704.1-201ENST00000411586 781 ntBASIC4.58□□□□□ -1.68
VRK1Q99986 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.58□□□□□ -1.68
VRK1Q99986 AC093655.2-201ENST00000425735 631 ntBASIC4.58□□□□□ -1.68
VRK1Q99986 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.58□□□□□ -1.68
VRK1Q99986 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.58□□□□□ -1.68
VRK1Q99986 IFNWP4-201ENST00000453148 294 ntBASIC4.58□□□□□ -1.68
VRK1Q99986 RPS20P32-201ENST00000456044 356 ntBASIC4.58□□□□□ -1.68
VRK1Q99986 RN7SL222P-201ENST00000476452 299 ntBASIC4.58□□□□□ -1.68
VRK1Q99986 RN7SL727P-201ENST00000482164 296 ntBASIC4.58□□□□□ -1.68
VRK1Q99986 MTND1P3-201ENST00000484956 952 ntBASIC4.58□□□□□ -1.68
VRK1Q99986 IGBP1P4-201ENST00000503202 879 ntBASIC4.58□□□□□ -1.68
VRK1Q99986 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.58□□□□□ -1.68
VRK1Q99986 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.58□□□□□ -1.68
VRK1Q99986 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.58□□□□□ -1.68
VRK1Q99986 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.58□□□□□ -1.68
VRK1Q99986 Y_RNA.672-201ENST00000516289 104 ntBASIC4.58□□□□□ -1.68
VRK1Q99986 AF186190.1-201ENST00000517470 480 ntBASIC4.58□□□□□ -1.68
VRK1Q99986 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.58□□□□□ -1.68
VRK1Q99986 AC022882.1-201ENST00000532142 501 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms