Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC026336.1-201ENST00000466577 351 ntBASIC6.7□□□□□ -1.34
PHOX2BQ99453 AC231760.1-201ENST00000498002 260 ntBASIC6.7□□□□□ -1.34
PHOX2BQ99453 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC6.7□□□□□ -1.34
PHOX2BQ99453 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC6.7□□□□□ -1.34
PHOX2BQ99453 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC6.7□□□□□ -1.34
PHOX2BQ99453 AC025423.5-201ENST00000550230 219 ntBASIC6.7□□□□□ -1.34
PHOX2BQ99453 AC013283.1-201ENST00000557282 492 ntBASIC6.7□□□□□ -1.34
PHOX2BQ99453 MRPS21P8-201ENST00000569196 235 ntBASIC6.7□□□□□ -1.34
PHOX2BQ99453 MIR3691-201ENST00000578066 90 ntBASIC6.7□□□□□ -1.34
PHOX2BQ99453 AC110743.1-201ENST00000584870 478 ntBASIC6.7□□□□□ -1.34
PHOX2BQ99453 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC6.7□□□□□ -1.34
PHOX2BQ99453 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.7□□□□□ -1.34
PHOX2BQ99453 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
PHOX2BQ99453 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.7□□□□□ -1.34
PHOX2BQ99453 ALB-209ENST00000503124 1741 ntTSL 5 BASIC6.7□□□□□ -1.34
PHOX2BQ99453 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PHOX2BQ99453 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
PHOX2BQ99453 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.7□□□□□ -1.34
PHOX2BQ99453 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
PHOX2BQ99453 SOCS5P3-201ENST00000425115 1576 ntBASIC6.69□□□□□ -1.34
PHOX2BQ99453 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PHOX2BQ99453 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PHOX2BQ99453 AC012213.2-201ENST00000562917 4597 ntBASIC6.69□□□□□ -1.34
PHOX2BQ99453 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PHOX2BQ99453 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PHOX2BQ99453 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.69□□□□□ -1.34
PHOX2BQ99453 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PHOX2BQ99453 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.69□□□□□ -1.34
PHOX2BQ99453 MAPK10-270ENST00000641102 3538 ntBASIC6.69□□□□□ -1.34
PHOX2BQ99453 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PHOX2BQ99453 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.69□□□□□ -1.34
PHOX2BQ99453 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
PHOX2BQ99453 RNU1-24P-201ENST00000364285 165 ntBASIC6.69□□□□□ -1.34
PHOX2BQ99453 RNU6-596P-201ENST00000365395 98 ntBASIC6.69□□□□□ -1.34
PHOX2BQ99453 Y_RNA.785-201ENST00000384290 109 ntBASIC6.69□□□□□ -1.34
PHOX2BQ99453 Y_RNA.555-201ENST00000384673 110 ntBASIC6.69□□□□□ -1.34
PHOX2BQ99453 MIR130B-202ENST00000385018 82 ntBASIC6.69□□□□□ -1.34
PHOX2BQ99453 RNU11-4P-201ENST00000391149 133 ntBASIC6.69□□□□□ -1.34
PHOX2BQ99453 RNU6ATAC16P-201ENST00000408591 138 ntBASIC6.69□□□□□ -1.34
PHOX2BQ99453 AC108032.1-201ENST00000416706 207 ntBASIC6.69□□□□□ -1.34
PHOX2BQ99453 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC6.69□□□□□ -1.34
PHOX2BQ99453 ATP5LP2-201ENST00000440646 311 ntBASIC6.69□□□□□ -1.34
PHOX2BQ99453 AL121871.1-201ENST00000443413 436 ntBASIC6.69□□□□□ -1.34
PHOX2BQ99453 AC243772.1-201ENST00000451620 410 ntBASIC6.69□□□□□ -1.34
PHOX2BQ99453 RNU7-138P-201ENST00000459479 64 ntBASIC6.69□□□□□ -1.34
PHOX2BQ99453 MED28P2-201ENST00000475771 317 ntBASIC6.69□□□□□ -1.34
PHOX2BQ99453 RN7SL826P-201ENST00000479724 288 ntBASIC6.69□□□□□ -1.34
PHOX2BQ99453 GZMAP1-201ENST00000503054 631 ntBASIC6.69□□□□□ -1.34
PHOX2BQ99453 AC083829.1-201ENST00000503756 657 ntBASIC6.69□□□□□ -1.34
PHOX2BQ99453 HMGB3P17-201ENST00000504195 649 ntBASIC6.69□□□□□ -1.34
PHOX2BQ99453 AC018645.1-201ENST00000505003 109 ntBASIC6.69□□□□□ -1.34
PHOX2BQ99453 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC6.69□□□□□ -1.34
PHOX2BQ99453 SNORA40.15-201ENST00000516884 107 ntBASIC6.69□□□□□ -1.34
PHOX2BQ99453 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.69□□□□□ -1.34
PHOX2BQ99453 HSPE1P20-201ENST00000538133 289 ntBASIC6.69□□□□□ -1.34
PHOX2BQ99453 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC6.69□□□□□ -1.34
PHOX2BQ99453 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.69□□□□□ -1.34
PHOX2BQ99453 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.69□□□□□ -1.34
PHOX2BQ99453 HMGB3P26-201ENST00000560051 582 ntBASIC6.69□□□□□ -1.34
PHOX2BQ99453 AC109446.1-201ENST00000566172 220 ntBASIC6.69□□□□□ -1.34
PHOX2BQ99453 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC6.69□□□□□ -1.34
PHOX2BQ99453 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.69□□□□□ -1.34
PHOX2BQ99453 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.69□□□□□ -1.34
PHOX2BQ99453 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.69□□□□□ -1.34
PHOX2BQ99453 AC123786.2-201ENST00000603459 275 ntBASIC6.69□□□□□ -1.34
PHOX2BQ99453 CYCSP1-201ENST00000604815 315 ntBASIC6.69□□□□□ -1.34
PHOX2BQ99453 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.69□□□□□ -1.34
PHOX2BQ99453 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.69□□□□□ -1.34
PHOX2BQ99453 TUG1_2.1-201ENST00000614234 87 ntBASIC6.69□□□□□ -1.34
PHOX2BQ99453 AP001264.1-201ENST00000620602 703 ntBASIC6.69□□□□□ -1.34
PHOX2BQ99453 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.69□□□□□ -1.34
PHOX2BQ99453 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PHOX2BQ99453 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PHOX2BQ99453 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PHOX2BQ99453 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.69□□□□□ -1.34
PHOX2BQ99453 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PHOX2BQ99453 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.69□□□□□ -1.34
PHOX2BQ99453 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
PHOX2BQ99453 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PHOX2BQ99453 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
PHOX2BQ99453 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PHOX2BQ99453 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
PHOX2BQ99453 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PHOX2BQ99453 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.69□□□□□ -1.34
PHOX2BQ99453 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.68□□□□□ -1.34
PHOX2BQ99453 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.68□□□□□ -1.34
PHOX2BQ99453 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PHOX2BQ99453 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PHOX2BQ99453 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC6.68□□□□□ -1.34
PHOX2BQ99453 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PHOX2BQ99453 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
PHOX2BQ99453 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
PHOX2BQ99453 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PHOX2BQ99453 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PHOX2BQ99453 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
PHOX2BQ99453 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PHOX2BQ99453 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PHOX2BQ99453 AC007114.2-201ENST00000576014 4281 ntBASIC6.68□□□□□ -1.34
PHOX2BQ99453 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PHOX2BQ99453 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms