Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 AC083843.3-201ENST00000623679 2186 ntBASIC5.63□□□□□ -1.51
PHC3Q8NDX5 MAPK10-349ENST00000641767 3661 ntBASIC5.63□□□□□ -1.51
PHC3Q8NDX5 AC108467.2-201ENST00000617640 1597 ntBASIC5.63□□□□□ -1.51
PHC3Q8NDX5 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
PHC3Q8NDX5 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 PHKBP1-201ENST00000450951 1951 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 NACAP2-201ENST00000318548 624 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 AL159987.1-201ENST00000347911 293 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 MIR375-201ENST00000362103 64 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 RNU2-21P-201ENST00000410368 188 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 AC069213.2-201ENST00000420238 366 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 AL365400.1-201ENST00000431854 640 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 DDX3P2-201ENST00000446138 111 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 RPL31P15-201ENST00000449770 338 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 BX842559.2-201ENST00000451418 605 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 FRG2FP-204ENST00000453982 852 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 RPS27AP17-201ENST00000463344 455 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 AC010683.1-201ENST00000473673 378 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 AC022215.1-201ENST00000481770 362 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 AC009120.1-201ENST00000493458 473 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 AC018552.3-201ENST00000567416 561 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 AC127024.5-201ENST00000580085 462 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 MIR4310-201ENST00000582950 57 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 UBE2L4-201ENST00000587688 464 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 AC010424.2-201ENST00000607594 443 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 uc_338.12-201ENST00000616344 181 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 RN7SL544P-201ENST00000617232 284 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 AL354950.2-201ENST00000617939 290 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 RN7SL763P-201ENST00000620922 284 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 FRG1KP-201ENST00000623592 341 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 AC100810.6-201ENST00000638068 285 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 AL157700.1-201ENST00000561973 1432 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 DDX18P3-201ENST00000404856 2007 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 AL022322.2-201ENST00000624072 20397 ntBASIC5.62□□□□□ -1.51
PHC3Q8NDX5 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.62□□□□□ -1.51
PHC3Q8NDX5 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
PHC3Q8NDX5 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
PHC3Q8NDX5 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PHC3Q8NDX5 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
PHC3Q8NDX5 SNORA64.1-201ENST00000362600 132 ntBASIC5.61□□□□□ -1.51
PHC3Q8NDX5 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.61□□□□□ -1.51
PHC3Q8NDX5 RNA5SP284-201ENST00000384547 118 ntBASIC5.61□□□□□ -1.51
PHC3Q8NDX5 MIR1-2-201ENST00000384961 85 ntBASIC5.61□□□□□ -1.51
PHC3Q8NDX5 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.61□□□□□ -1.51
PHC3Q8NDX5 AL031985.1-201ENST00000392713 418 ntBASIC5.61□□□□□ -1.51
PHC3Q8NDX5 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.61□□□□□ -1.51
PHC3Q8NDX5 ADAM5-202ENST00000399789 1942 ntBASIC5.61□□□□□ -1.51
PHC3Q8NDX5 Z97832.1-201ENST00000402490 328 ntBASIC5.61□□□□□ -1.51
PHC3Q8NDX5 AL049697.2-201ENST00000403708 294 ntBASIC5.61□□□□□ -1.51
PHC3Q8NDX5 FAT1P1-201ENST00000406588 507 ntBASIC5.61□□□□□ -1.51
PHC3Q8NDX5 RNU2-15P-201ENST00000410692 191 ntBASIC5.61□□□□□ -1.51
PHC3Q8NDX5 RNU2-62P-201ENST00000410868 191 ntBASIC5.61□□□□□ -1.51
PHC3Q8NDX5 EEF1A1P40-201ENST00000412883 573 ntBASIC5.61□□□□□ -1.51
PHC3Q8NDX5 AC009161.1-201ENST00000417306 376 ntBASIC5.61□□□□□ -1.51
PHC3Q8NDX5 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC5.61□□□□□ -1.51
PHC3Q8NDX5 AC007529.1-201ENST00000418574 2178 ntBASIC5.61□□□□□ -1.51
PHC3Q8NDX5 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.61□□□□□ -1.51
PHC3Q8NDX5 FABP7P1-201ENST00000424004 391 ntBASIC5.61□□□□□ -1.51
PHC3Q8NDX5 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC5.61□□□□□ -1.51
PHC3Q8NDX5 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.61□□□□□ -1.51
PHC3Q8NDX5 SUMO2P3-201ENST00000438311 288 ntBASIC5.61□□□□□ -1.51
PHC3Q8NDX5 RPS15AP9-201ENST00000439856 381 ntBASIC5.61□□□□□ -1.51
PHC3Q8NDX5 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PHC3Q8NDX5 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.61□□□□□ -1.51
PHC3Q8NDX5 RPS4XP10-201ENST00000465034 731 ntBASIC5.61□□□□□ -1.51
PHC3Q8NDX5 RPS23P6-201ENST00000466136 431 ntBASIC5.61□□□□□ -1.51
PHC3Q8NDX5 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
PHC3Q8NDX5 AC093278.1-201ENST00000494700 600 ntBASIC5.61□□□□□ -1.51
PHC3Q8NDX5 AC108693.1-201ENST00000496068 432 ntBASIC5.61□□□□□ -1.51
PHC3Q8NDX5 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms