Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 RAP1BP1-201ENST00000412709 553 ntBASIC4.53□□□□□ -1.68
CFAP43Q8NDM7 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.53□□□□□ -1.68
CFAP43Q8NDM7 FTH1P6-201ENST00000430768 320 ntBASIC4.53□□□□□ -1.68
CFAP43Q8NDM7 UQCRHP3-201ENST00000451503 251 ntBASIC4.53□□□□□ -1.68
CFAP43Q8NDM7 AC112184.1-201ENST00000505179 312 ntBASIC4.53□□□□□ -1.68
CFAP43Q8NDM7 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.53□□□□□ -1.68
CFAP43Q8NDM7 AC111000.2-201ENST00000507775 550 ntBASIC4.53□□□□□ -1.68
CFAP43Q8NDM7 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.53□□□□□ -1.68
CFAP43Q8NDM7 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.53□□□□□ -1.68
CFAP43Q8NDM7 OR6R2P-201ENST00000609216 300 ntBASIC4.53□□□□□ -1.68
CFAP43Q8NDM7 AP006437.1-201ENST00000641440 3685 ntBASIC4.53□□□□□ -1.68
CFAP43Q8NDM7 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CFAP43Q8NDM7 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CFAP43Q8NDM7 MAPK10-362ENST00000641864 4484 ntBASIC4.53□□□□□ -1.68
CFAP43Q8NDM7 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CFAP43Q8NDM7 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CFAP43Q8NDM7 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.52□□□□□ -1.69
CFAP43Q8NDM7 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.52□□□□□ -1.69
CFAP43Q8NDM7 U3.6-201ENST00000363622 211 ntBASIC4.52□□□□□ -1.69
CFAP43Q8NDM7 AL139039.1-201ENST00000401900 692 ntBASIC4.52□□□□□ -1.69
CFAP43Q8NDM7 AC245054.2-201ENST00000415639 319 ntBASIC4.52□□□□□ -1.69
CFAP43Q8NDM7 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.52□□□□□ -1.69
CFAP43Q8NDM7 ISCA1P6-201ENST00000427740 390 ntBASIC4.52□□□□□ -1.69
CFAP43Q8NDM7 NPM1P24-201ENST00000428039 894 ntBASIC4.52□□□□□ -1.69
CFAP43Q8NDM7 WASF1P1-201ENST00000447560 1131 ntBASIC4.52□□□□□ -1.69
CFAP43Q8NDM7 CYCSP20-201ENST00000473154 315 ntBASIC4.52□□□□□ -1.69
CFAP43Q8NDM7 ANXA2P1-201ENST00000505539 926 ntBASIC4.52□□□□□ -1.69
CFAP43Q8NDM7 AC008549.1-201ENST00000512900 643 ntBASIC4.52□□□□□ -1.69
CFAP43Q8NDM7 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.52□□□□□ -1.69
CFAP43Q8NDM7 AL158827.2-201ENST00000602494 330 ntBASIC4.52□□□□□ -1.69
CFAP43Q8NDM7 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CFAP43Q8NDM7 AL691447.3-201ENST00000635020 330 ntBASIC4.52□□□□□ -1.69
CFAP43Q8NDM7 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CFAP43Q8NDM7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CFAP43Q8NDM7 ATP5F1P6-201ENST00000402768 767 ntBASIC4.51□□□□□ -1.69
CFAP43Q8NDM7 AC105402.1-201ENST00000413336 545 ntBASIC4.51□□□□□ -1.69
CFAP43Q8NDM7 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.51□□□□□ -1.69
CFAP43Q8NDM7 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CFAP43Q8NDM7 RNU6-991P-201ENST00000516168 107 ntBASIC4.51□□□□□ -1.69
CFAP43Q8NDM7 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.51□□□□□ -1.69
CFAP43Q8NDM7 AL591516.1-201ENST00000611326 274 ntBASIC4.51□□□□□ -1.69
CFAP43Q8NDM7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CFAP43Q8NDM7 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CFAP43Q8NDM7 RNU6-805P-201ENST00000365643 106 ntBASIC4.51□□□□□ -1.69
CFAP43Q8NDM7 RN7SKP192-201ENST00000411291 327 ntBASIC4.51□□□□□ -1.69
CFAP43Q8NDM7 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.51□□□□□ -1.69
CFAP43Q8NDM7 AC245291.1-201ENST00000419501 328 ntBASIC4.51□□□□□ -1.69
CFAP43Q8NDM7 AC233981.1-201ENST00000423224 461 ntBASIC4.51□□□□□ -1.69
CFAP43Q8NDM7 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CFAP43Q8NDM7 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.51□□□□□ -1.69
CFAP43Q8NDM7 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.51□□□□□ -1.69
CFAP43Q8NDM7 snoU13.15-201ENST00000459407 104 ntBASIC4.51□□□□□ -1.69
CFAP43Q8NDM7 AC008837.1-201ENST00000511513 412 ntBASIC4.51□□□□□ -1.69
CFAP43Q8NDM7 RN7SKP244-201ENST00000516513 307 ntBASIC4.51□□□□□ -1.69
CFAP43Q8NDM7 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.51□□□□□ -1.69
CFAP43Q8NDM7 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CFAP43Q8NDM7 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.51□□□□□ -1.69
CFAP43Q8NDM7 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.51□□□□□ -1.69
CFAP43Q8NDM7 ZNF658B-202ENST00000615961 3375 ntBASIC4.51□□□□□ -1.69
CFAP43Q8NDM7 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.51□□□□□ -1.69
CFAP43Q8NDM7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC4.5□□□□□ -1.69
CFAP43Q8NDM7 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
CFAP43Q8NDM7 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.5□□□□□ -1.69
CFAP43Q8NDM7 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.5□□□□□ -1.69
CFAP43Q8NDM7 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.5□□□□□ -1.69
CFAP43Q8NDM7 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.5□□□□□ -1.69
CFAP43Q8NDM7 AC117522.3-201ENST00000507974 584 ntBASIC4.5□□□□□ -1.69
CFAP43Q8NDM7 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.5□□□□□ -1.69
CFAP43Q8NDM7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CFAP43Q8NDM7 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.5□□□□□ -1.69
CFAP43Q8NDM7 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.5□□□□□ -1.69
CFAP43Q8NDM7 AC079089.3-201ENST00000603094 673 ntBASIC4.5□□□□□ -1.69
CFAP43Q8NDM7 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
CFAP43Q8NDM7 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CFAP43Q8NDM7 RNA5SP21-201ENST00000410917 96 ntBASIC4.49□□□□□ -1.69
CFAP43Q8NDM7 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.49□□□□□ -1.69
CFAP43Q8NDM7 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.49□□□□□ -1.69
CFAP43Q8NDM7 AC107016.2-201ENST00000547968 190 ntBASIC4.49□□□□□ -1.69
CFAP43Q8NDM7 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.49□□□□□ -1.69
CFAP43Q8NDM7 AP000919.1-202ENST00000581139 1264 ntBASIC4.49□□□□□ -1.69
CFAP43Q8NDM7 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC4.49□□□□□ -1.69
CFAP43Q8NDM7 AP004607.9-201ENST00000618202 316 ntBASIC4.49□□□□□ -1.69
CFAP43Q8NDM7 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CFAP43Q8NDM7 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CFAP43Q8NDM7 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CFAP43Q8NDM7 RNA5SP383-201ENST00000362934 120 ntBASIC4.48□□□□□ -1.69
CFAP43Q8NDM7 AL360182.1-201ENST00000397433 468 ntBASIC4.48□□□□□ -1.69
CFAP43Q8NDM7 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CFAP43Q8NDM7 RN7SKP247-201ENST00000411094 308 ntBASIC4.48□□□□□ -1.69
CFAP43Q8NDM7 RPS12P5-201ENST00000423449 371 ntBASIC4.48□□□□□ -1.69
CFAP43Q8NDM7 IFNA11P-201ENST00000446352 526 ntBASIC4.48□□□□□ -1.69
CFAP43Q8NDM7 AC010468.1-201ENST00000461022 817 ntBASIC4.48□□□□□ -1.69
CFAP43Q8NDM7 AC003982.1-202ENST00000469928 248 ntBASIC4.48□□□□□ -1.69
CFAP43Q8NDM7 LINC00901.1-201ENST00000617252 152 ntBASIC4.48□□□□□ -1.69
CFAP43Q8NDM7 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.48□□□□□ -1.69
CFAP43Q8NDM7 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.48□□□□□ -1.69
CFAP43Q8NDM7 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
CFAP43Q8NDM7 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.48□□□□□ -1.69
CFAP43Q8NDM7 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CFAP43Q8NDM7 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms