Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC093281.2-201ENST00000510153 597 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 AC008958.1-201ENST00000511047 682 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4□□□□□ -1.77
BEST3Q8N1M1 RNU6-583P-201ENST00000516012 92 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 RNY4P37-201ENST00000516225 96 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4□□□□□ -1.77
BEST3Q8N1M1 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4□□□□□ -1.77
BEST3Q8N1M1 VN1R90P-201ENST00000595717 726 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 AC121247.2-201ENST00000604776 136 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 AL354984.3-201ENST00000604803 325 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 AL392048.1-201ENST00000613946 534 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 AL158196.1-201ENST00000616786 434 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 AC131238.1-201ENST00000617135 328 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4□□□□□ -1.77
BEST3Q8N1M1 FAM157B-203ENST00000639350 358 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4□□□□□ -1.77
BEST3Q8N1M1 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4□□□□□ -1.77
BEST3Q8N1M1 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
BEST3Q8N1M1 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
BEST3Q8N1M1 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
BEST3Q8N1M1 MTND4P26-201ENST00000415971 1359 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 ELL2P4-201ENST00000446870 1376 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 LARP1BP1-201ENST00000506036 1359 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
BEST3Q8N1M1 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
BEST3Q8N1M1 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 AL122126.1-201ENST00000546905 1318 ntBASIC3.99□□□□□ -1.77
BEST3Q8N1M1 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 ATP5F1P4-201ENST00000397288 746 ntBASIC3.99□□□□□ -1.77
BEST3Q8N1M1 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 SSXP10-201ENST00000402595 565 ntBASIC3.99□□□□□ -1.77
BEST3Q8N1M1 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 RNA5SP104-201ENST00000410989 118 ntBASIC3.99□□□□□ -1.77
BEST3Q8N1M1 RN7SKP263-201ENST00000411194 309 ntBASIC3.99□□□□□ -1.77
BEST3Q8N1M1 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 RPL17P36-201ENST00000420302 549 ntBASIC3.99□□□□□ -1.77
BEST3Q8N1M1 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 AL445567.1-201ENST00000439121 144 ntBASIC3.99□□□□□ -1.77
BEST3Q8N1M1 AC092427.1-201ENST00000439177 601 ntBASIC3.99□□□□□ -1.77
BEST3Q8N1M1 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 RPL26P28-201ENST00000451325 435 ntBASIC3.99□□□□□ -1.77
BEST3Q8N1M1 IFNWP4-201ENST00000453148 294 ntBASIC3.99□□□□□ -1.77
BEST3Q8N1M1 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 TRBV26-201ENST00000456572 344 ntBASIC3.99□□□□□ -1.77
BEST3Q8N1M1 RN7SL691P-201ENST00000494487 301 ntBASIC3.99□□□□□ -1.77
BEST3Q8N1M1 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 RNA5SP49-201ENST00000516450 115 ntBASIC3.99□□□□□ -1.77
BEST3Q8N1M1 RNU6-678P-201ENST00000516832 109 ntBASIC3.99□□□□□ -1.77
BEST3Q8N1M1 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.99□□□□□ -1.77
BEST3Q8N1M1 VN1R92P-201ENST00000598511 928 ntBASIC3.99□□□□□ -1.77
BEST3Q8N1M1 DUXAP11-201ENST00000603858 526 ntBASIC3.99□□□□□ -1.77
BEST3Q8N1M1 Z94722.1-201ENST00000604328 474 ntBASIC3.99□□□□□ -1.77
BEST3Q8N1M1 AC067959.1-201ENST00000604334 379 ntBASIC3.99□□□□□ -1.77
BEST3Q8N1M1 AC114878.2-201ENST00000604863 1251 ntBASIC3.99□□□□□ -1.77
BEST3Q8N1M1 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 Z98200.1-201ENST00000607298 470 ntBASIC3.99□□□□□ -1.77
BEST3Q8N1M1 AC122133.1-201ENST00000613964 233 ntBASIC3.99□□□□□ -1.77
BEST3Q8N1M1 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.99□□□□□ -1.77
BEST3Q8N1M1 AL021997.2-201ENST00000615674 271 ntBASIC3.99□□□□□ -1.77
BEST3Q8N1M1 AC007546.2-201ENST00000623996 360 ntBASIC3.99□□□□□ -1.77
BEST3Q8N1M1 AC010608.2-201ENST00000624830 470 ntBASIC3.99□□□□□ -1.77
BEST3Q8N1M1 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 FP325313.1-201ENST00000638228 703 ntBASIC3.99□□□□□ -1.77
BEST3Q8N1M1 SAGE4P-201ENST00000442271 3381 ntBASIC3.99□□□□□ -1.77
BEST3Q8N1M1 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.99□□□□□ -1.77
BEST3Q8N1M1 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 LINC00561-201ENST00000565815 2738 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 RNA5SP52-201ENST00000362448 134 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 RNA5SP515-201ENST00000364570 118 ntBASIC3.98□□□□□ -1.77
BEST3Q8N1M1 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
BEST3Q8N1M1 RNU6-1226P-201ENST00000384317 107 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms