Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RNF43Q68DV7 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RNF43Q68DV7 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
RNF43Q68DV7 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
RNF43Q68DV7 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC5.8□□□□□ -1.48
RNF43Q68DV7 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.8□□□□□ -1.48
RNF43Q68DV7 RNA5SP234-201ENST00000363916 119 ntBASIC5.8□□□□□ -1.48
RNF43Q68DV7 RNU6-831P-201ENST00000384548 107 ntBASIC5.8□□□□□ -1.48
RNF43Q68DV7 MIR550A3-201ENST00000390735 95 ntBASIC5.8□□□□□ -1.48
RNF43Q68DV7 AL121972.1-201ENST00000402023 252 ntBASIC5.8□□□□□ -1.48
RNF43Q68DV7 MRPL42P2-201ENST00000403169 426 ntBASIC5.8□□□□□ -1.48
RNF43Q68DV7 AL136116.1-201ENST00000403591 381 ntBASIC5.8□□□□□ -1.48
RNF43Q68DV7 RN7SKP266-201ENST00000410232 287 ntBASIC5.8□□□□□ -1.48
RNF43Q68DV7 AC234782.4-201ENST00000417646 1048 ntBASIC5.8□□□□□ -1.48
RNF43Q68DV7 RPS15AP9-201ENST00000439856 381 ntBASIC5.8□□□□□ -1.48
RNF43Q68DV7 AL136380.1-201ENST00000447970 162 ntBASIC5.8□□□□□ -1.48
RNF43Q68DV7 AC073850.1-201ENST00000449243 255 ntBASIC5.8□□□□□ -1.48
RNF43Q68DV7 CACYBPP2-201ENST00000453625 678 ntBASIC5.8□□□□□ -1.48
RNF43Q68DV7 RNU7-152P-201ENST00000458982 64 ntBASIC5.8□□□□□ -1.48
RNF43Q68DV7 VN1R17P-201ENST00000472048 1090 ntBASIC5.8□□□□□ -1.48
RNF43Q68DV7 DUTP1-201ENST00000493631 470 ntBASIC5.8□□□□□ -1.48
RNF43Q68DV7 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.8□□□□□ -1.48
RNF43Q68DV7 IGLV3-24-201ENST00000517477 197 ntBASIC5.8□□□□□ -1.48
RNF43Q68DV7 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.8□□□□□ -1.48
RNF43Q68DV7 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.8□□□□□ -1.48
RNF43Q68DV7 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.8□□□□□ -1.48
RNF43Q68DV7 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC5.8□□□□□ -1.48
RNF43Q68DV7 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.8□□□□□ -1.48
RNF43Q68DV7 AC015720.2-201ENST00000567709 334 ntBASIC5.8□□□□□ -1.48
RNF43Q68DV7 AC099489.2-201ENST00000574976 260 ntBASIC5.8□□□□□ -1.48
RNF43Q68DV7 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.8□□□□□ -1.48
RNF43Q68DV7 MIR4311-201ENST00000580794 100 ntBASIC5.8□□□□□ -1.48
RNF43Q68DV7 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
RNF43Q68DV7 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.8□□□□□ -1.48
RNF43Q68DV7 AC104785.1-201ENST00000603220 588 ntBASIC5.8□□□□□ -1.48
RNF43Q68DV7 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC5.8□□□□□ -1.48
RNF43Q68DV7 AC068870.2-201ENST00000620635 389 ntBASIC5.8□□□□□ -1.48
RNF43Q68DV7 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.8□□□□□ -1.48
RNF43Q68DV7 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.8□□□□□ -1.48
RNF43Q68DV7 AC244517.12-201ENST00000623581 663 ntBASIC5.8□□□□□ -1.48
RNF43Q68DV7 AC079597.1-201ENST00000624306 508 ntBASIC5.8□□□□□ -1.48
RNF43Q68DV7 AL359757.2-201ENST00000624309 274 ntBASIC5.8□□□□□ -1.48
RNF43Q68DV7 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RNF43Q68DV7 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
RNF43Q68DV7 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.8□□□□□ -1.48
RNF43Q68DV7 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RNF43Q68DV7 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.79□□□□□ -1.48
RNF43Q68DV7 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.79□□□□□ -1.48
RNF43Q68DV7 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
RNF43Q68DV7 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
RNF43Q68DV7 AP004607.3-201ENST00000530354 3915 ntBASIC5.79□□□□□ -1.48
RNF43Q68DV7 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RNF43Q68DV7 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
RNF43Q68DV7 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RNF43Q68DV7 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.79□□□□□ -1.48
RNF43Q68DV7 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.79□□□□□ -1.48
RNF43Q68DV7 SNRPEP3-201ENST00000338402 276 ntBASIC5.79□□□□□ -1.48
RNF43Q68DV7 RNU6-289P-201ENST00000364093 107 ntBASIC5.79□□□□□ -1.48
RNF43Q68DV7 SNORA63.7-201ENST00000365579 123 ntBASIC5.79□□□□□ -1.48
RNF43Q68DV7 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.79□□□□□ -1.48
RNF43Q68DV7 AL591416.1-201ENST00000404015 867 ntBASIC5.79□□□□□ -1.48
RNF43Q68DV7 RN7SKP213-201ENST00000410746 298 ntBASIC5.79□□□□□ -1.48
RNF43Q68DV7 RNU4-14P-201ENST00000410858 122 ntBASIC5.79□□□□□ -1.48
RNF43Q68DV7 RNU6-1304P-201ENST00000411374 106 ntBASIC5.79□□□□□ -1.48
RNF43Q68DV7 AL133482.1-201ENST00000415988 498 ntBASIC5.79□□□□□ -1.48
RNF43Q68DV7 AL133173.1-201ENST00000423458 397 ntBASIC5.79□□□□□ -1.48
RNF43Q68DV7 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.79□□□□□ -1.48
RNF43Q68DV7 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.79□□□□□ -1.48
RNF43Q68DV7 RPS3AP52-201ENST00000435639 297 ntBASIC5.79□□□□□ -1.48
RNF43Q68DV7 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.79□□□□□ -1.48
RNF43Q68DV7 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RNF43Q68DV7 AL138787.1-202ENST00000437804 898 ntBASIC5.79□□□□□ -1.48
RNF43Q68DV7 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.79□□□□□ -1.48
RNF43Q68DV7 TXNP5-201ENST00000441043 315 ntBASIC5.79□□□□□ -1.48
RNF43Q68DV7 AC019185.1-201ENST00000442718 389 ntBASIC5.79□□□□□ -1.48
RNF43Q68DV7 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC5.79□□□□□ -1.48
RNF43Q68DV7 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.79□□□□□ -1.48
RNF43Q68DV7 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.79□□□□□ -1.48
RNF43Q68DV7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.79□□□□□ -1.48
RNF43Q68DV7 AC068587.1-201ENST00000483613 781 ntBASIC5.79□□□□□ -1.48
RNF43Q68DV7 HMGB1P30-201ENST00000492455 606 ntBASIC5.79□□□□□ -1.48
RNF43Q68DV7 RN7SL808P-201ENST00000496066 299 ntBASIC5.79□□□□□ -1.48
RNF43Q68DV7 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.79□□□□□ -1.48
RNF43Q68DV7 AC024558.1-201ENST00000505008 528 ntBASIC5.79□□□□□ -1.48
RNF43Q68DV7 TTC39CP1-201ENST00000512513 755 ntBASIC5.79□□□□□ -1.48
RNF43Q68DV7 AC093303.1-201ENST00000514549 295 ntBASIC5.79□□□□□ -1.48
RNF43Q68DV7 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.79□□□□□ -1.48
RNF43Q68DV7 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.79□□□□□ -1.48
RNF43Q68DV7 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.79□□□□□ -1.48
RNF43Q68DV7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.79□□□□□ -1.48
RNF43Q68DV7 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.79□□□□□ -1.48
RNF43Q68DV7 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.79□□□□□ -1.48
RNF43Q68DV7 POLR2KP1-201ENST00000553226 168 ntBASIC5.79□□□□□ -1.48
RNF43Q68DV7 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.79□□□□□ -1.48
RNF43Q68DV7 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.79□□□□□ -1.48
RNF43Q68DV7 AC093519.1-201ENST00000566109 298 ntBASIC5.79□□□□□ -1.48
RNF43Q68DV7 MIR3167-201ENST00000579623 85 ntBASIC5.79□□□□□ -1.48
RNF43Q68DV7 MIR548Y-201ENST00000582739 110 ntBASIC5.79□□□□□ -1.48
RNF43Q68DV7 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.79□□□□□ -1.48
RNF43Q68DV7 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms