Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC1.71□□□□□ -2.14
UBR4Q5T4S7 SNRPEP3-201ENST00000338402 276 ntBASIC1.7□□□□□ -2.14
UBR4Q5T4S7 Y_RNA.136-201ENST00000363444 102 ntBASIC1.7□□□□□ -2.14
UBR4Q5T4S7 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 AC099506.2-201ENST00000623074 221 ntBASIC1.7□□□□□ -2.14
UBR4Q5T4S7 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 AC107021.2-201ENST00000567714 2095 ntBASIC1.7□□□□□ -2.14
UBR4Q5T4S7 AC026523.2-201ENST00000625039 7739 ntBASIC1.7□□□□□ -2.14
UBR4Q5T4S7 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 AC022336.2-201ENST00000568966 2538 ntBASIC1.7□□□□□ -2.14
UBR4Q5T4S7 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 AC073136.2-201ENST00000417282 849 ntBASIC1.7□□□□□ -2.14
UBR4Q5T4S7 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 HMGB3P13-201ENST00000511263 607 ntBASIC1.7□□□□□ -2.14
UBR4Q5T4S7 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 RNA5SP121-201ENST00000516537 101 ntBASIC1.7□□□□□ -2.14
UBR4Q5T4S7 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 AC022106.2-201ENST00000620114 757 ntBASIC1.7□□□□□ -2.14
UBR4Q5T4S7 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 Y_RNA.60-201ENST00000362831 98 ntBASIC1.7□□□□□ -2.14
UBR4Q5T4S7 RPL7L1P1-201ENST00000448259 785 ntBASIC1.7□□□□□ -2.14
UBR4Q5T4S7 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 AC016957.1-201ENST00000534895 309 ntBASIC1.7□□□□□ -2.14
UBR4Q5T4S7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 AC128687.2-201ENST00000609657 566 ntBASIC1.7□□□□□ -2.14
UBR4Q5T4S7 AL162574.2-201ENST00000614618 657 ntBASIC1.7□□□□□ -2.14
UBR4Q5T4S7 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 CUBN-201ENST00000377823 705 ntTSL 3 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 Y_RNA.390-201ENST00000383932 102 ntBASIC1.7□□□□□ -2.14
UBR4Q5T4S7 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 AC004057.1-201ENST00000485827 348 ntBASIC1.7□□□□□ -2.14
UBR4Q5T4S7 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 CYCSP28-201ENST00000534284 321 ntBASIC1.7□□□□□ -2.14
UBR4Q5T4S7 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 AL359893.1-201ENST00000447628 1580 ntBASIC1.7□□□□□ -2.14
UBR4Q5T4S7 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 AL138878.1-201ENST00000405131 347 ntBASIC1.7□□□□□ -2.14
UBR4Q5T4S7 OR2B8P-201ENST00000432841 938 ntBASIC1.7□□□□□ -2.14
UBR4Q5T4S7 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC1.7□□□□□ -2.14
UBR4Q5T4S7 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 FAM35BP-202ENST00000497389 3337 ntBASIC1.69□□□□□ -2.14
UBR4Q5T4S7 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 AC107081.3-201ENST00000612715 2034 ntBASIC1.69□□□□□ -2.14
UBR4Q5T4S7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 AL133412.1-201ENST00000380194 2992 ntBASIC1.69□□□□□ -2.14
UBR4Q5T4S7 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 RNU2-68P-201ENST00000410878 191 ntBASIC1.69□□□□□ -2.14
UBR4Q5T4S7 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 NPM1P25-201ENST00000429734 854 ntBASIC1.69□□□□□ -2.14
UBR4Q5T4S7 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 MIR6734-201ENST00000621166 68 ntBASIC1.69□□□□□ -2.14
UBR4Q5T4S7 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 AL592148.1-201ENST00000413568 445 ntBASIC1.69□□□□□ -2.14
UBR4Q5T4S7 AL445183.3-201ENST00000414168 502 ntBASIC1.69□□□□□ -2.14
UBR4Q5T4S7 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.69□□□□□ -2.14
UBR4Q5T4S7 AC127024.5-201ENST00000580085 462 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms