Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 AL158827.2-201ENST00000602494 330 ntBASIC4.71□□□□□ -1.66
SNAPC4Q5SXM2 AL691447.3-201ENST00000635020 330 ntBASIC4.71□□□□□ -1.66
SNAPC4Q5SXM2 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SNAPC4Q5SXM2 FAM133CP-201ENST00000332869 704 ntBASIC4.7□□□□□ -1.66
SNAPC4Q5SXM2 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNAPC4Q5SXM2 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.7□□□□□ -1.66
SNAPC4Q5SXM2 AL138827.1-201ENST00000402666 306 ntBASIC4.7□□□□□ -1.66
SNAPC4Q5SXM2 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.7□□□□□ -1.66
SNAPC4Q5SXM2 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.7□□□□□ -1.66
SNAPC4Q5SXM2 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.7□□□□□ -1.66
SNAPC4Q5SXM2 AP001025.2-201ENST00000490908 477 ntBASIC4.7□□□□□ -1.66
SNAPC4Q5SXM2 AC112184.1-201ENST00000505179 312 ntBASIC4.7□□□□□ -1.66
SNAPC4Q5SXM2 AL358913.1-201ENST00000554342 121 ntBASIC4.7□□□□□ -1.66
SNAPC4Q5SXM2 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.7□□□□□ -1.66
SNAPC4Q5SXM2 SNORD53-201ENST00000579969 78 ntBASIC4.7□□□□□ -1.66
SNAPC4Q5SXM2 AC008507.1-201ENST00000587506 734 ntBASIC4.7□□□□□ -1.66
SNAPC4Q5SXM2 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.7□□□□□ -1.66
SNAPC4Q5SXM2 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNAPC4Q5SXM2 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.7□□□□□ -1.66
SNAPC4Q5SXM2 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SNAPC4Q5SXM2 TTC39DP-201ENST00000416781 1688 ntBASIC4.7□□□□□ -1.66
SNAPC4Q5SXM2 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNAPC4Q5SXM2 U8.2-201ENST00000363156 134 ntBASIC4.69□□□□□ -1.66
SNAPC4Q5SXM2 RNA5SP68-201ENST00000363885 119 ntBASIC4.69□□□□□ -1.66
SNAPC4Q5SXM2 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.69□□□□□ -1.66
SNAPC4Q5SXM2 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.69□□□□□ -1.66
SNAPC4Q5SXM2 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.69□□□□□ -1.66
SNAPC4Q5SXM2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SNAPC4Q5SXM2 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.69□□□□□ -1.66
SNAPC4Q5SXM2 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNAPC4Q5SXM2 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC4.69□□□□□ -1.66
SNAPC4Q5SXM2 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNAPC4Q5SXM2 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNAPC4Q5SXM2 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SNAPC4Q5SXM2 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SNAPC4Q5SXM2 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNAPC4Q5SXM2 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNAPC4Q5SXM2 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SNAPC4Q5SXM2 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.69□□□□□ -1.66
SNAPC4Q5SXM2 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.69□□□□□ -1.66
SNAPC4Q5SXM2 RPL29P29-201ENST00000448725 423 ntBASIC4.69□□□□□ -1.66
SNAPC4Q5SXM2 RNU7-157P-201ENST00000459600 66 ntBASIC4.69□□□□□ -1.66
SNAPC4Q5SXM2 AC133134.1-201ENST00000466800 359 ntBASIC4.69□□□□□ -1.66
SNAPC4Q5SXM2 RPS29P21-201ENST00000496272 170 ntBASIC4.69□□□□□ -1.66
SNAPC4Q5SXM2 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.69□□□□□ -1.66
SNAPC4Q5SXM2 AC021146.1-201ENST00000511202 716 ntBASIC4.69□□□□□ -1.66
SNAPC4Q5SXM2 IGKV3-31-201ENST00000523109 329 ntBASIC4.69□□□□□ -1.66
SNAPC4Q5SXM2 AP001646.1-201ENST00000527936 915 ntBASIC4.69□□□□□ -1.66
SNAPC4Q5SXM2 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.69□□□□□ -1.66
SNAPC4Q5SXM2 AL122125.1-201ENST00000616999 600 ntBASIC4.69□□□□□ -1.66
SNAPC4Q5SXM2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SNAPC4Q5SXM2 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SNAPC4Q5SXM2 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
SNAPC4Q5SXM2 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SNAPC4Q5SXM2 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SNAPC4Q5SXM2 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SNAPC4Q5SXM2 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SNAPC4Q5SXM2 RHEBP3-201ENST00000411920 351 ntBASIC4.68□□□□□ -1.66
SNAPC4Q5SXM2 AC005189.1-201ENST00000431286 310 ntBASIC4.68□□□□□ -1.66
SNAPC4Q5SXM2 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.68□□□□□ -1.66
SNAPC4Q5SXM2 RPL23AP23-201ENST00000452590 471 ntBASIC4.68□□□□□ -1.66
SNAPC4Q5SXM2 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.68□□□□□ -1.66
SNAPC4Q5SXM2 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.68□□□□□ -1.66
SNAPC4Q5SXM2 AC006445.2-201ENST00000510061 472 ntBASIC4.68□□□□□ -1.66
SNAPC4Q5SXM2 AC008837.1-201ENST00000511513 412 ntBASIC4.68□□□□□ -1.66
SNAPC4Q5SXM2 RNA5SP148-201ENST00000516527 94 ntBASIC4.68□□□□□ -1.66
SNAPC4Q5SXM2 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.68□□□□□ -1.66
SNAPC4Q5SXM2 AC007954.1-201ENST00000554198 494 ntBASIC4.68□□□□□ -1.66
SNAPC4Q5SXM2 SERPINE4P-201ENST00000554978 281 ntBASIC4.68□□□□□ -1.66
SNAPC4Q5SXM2 AL592295.2-201ENST00000612578 206 ntBASIC4.68□□□□□ -1.66
SNAPC4Q5SXM2 AC019080.5-201ENST00000624891 757 ntBASIC4.68□□□□□ -1.66
SNAPC4Q5SXM2 AC093909.5-201ENST00000621839 1799 ntBASIC4.68□□□□□ -1.66
SNAPC4Q5SXM2 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.67□□□□□ -1.66
SNAPC4Q5SXM2 MAPK10-362ENST00000641864 4484 ntBASIC4.67□□□□□ -1.66
SNAPC4Q5SXM2 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
SNAPC4Q5SXM2 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SNAPC4Q5SXM2 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SNAPC4Q5SXM2 HMGN1P18-201ENST00000457642 277 ntBASIC4.67□□□□□ -1.66
SNAPC4Q5SXM2 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SNAPC4Q5SXM2 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.67□□□□□ -1.66
SNAPC4Q5SXM2 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.67□□□□□ -1.66
SNAPC4Q5SXM2 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SNAPC4Q5SXM2 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.67□□□□□ -1.66
SNAPC4Q5SXM2 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.67□□□□□ -1.66
SNAPC4Q5SXM2 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SNAPC4Q5SXM2 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SNAPC4Q5SXM2 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.66□□□□□ -1.66
SNAPC4Q5SXM2 LINC01355-201ENST00000566551 5444 ntBASIC4.66□□□□□ -1.66
SNAPC4Q5SXM2 SNORA79B-201ENST00000410557 148 ntBASIC4.66□□□□□ -1.66
SNAPC4Q5SXM2 RN7SKP192-201ENST00000411291 327 ntBASIC4.66□□□□□ -1.66
SNAPC4Q5SXM2 BX276092.3-201ENST00000424182 230 ntBASIC4.66□□□□□ -1.66
SNAPC4Q5SXM2 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SNAPC4Q5SXM2 AC104027.1-201ENST00000521887 300 ntBASIC4.66□□□□□ -1.66
SNAPC4Q5SXM2 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.66□□□□□ -1.66
SNAPC4Q5SXM2 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.66□□□□□ -1.66
SNAPC4Q5SXM2 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.66□□□□□ -1.66
SNAPC4Q5SXM2 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SNAPC4Q5SXM2 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SNAPC4Q5SXM2 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC4.65□□□□□ -1.66
SNAPC4Q5SXM2 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms