Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.08□□□□□ -1.28
VARS2Q5ST30 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
VARS2Q5ST30 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.08□□□□□ -1.28
VARS2Q5ST30 PRNCR1-201ENST00000635449 12727 ntBASIC7.08□□□□□ -1.28
VARS2Q5ST30 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.08□□□□□ -1.28
VARS2Q5ST30 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.08□□□□□ -1.28
VARS2Q5ST30 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC7.08□□□□□ -1.28
VARS2Q5ST30 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VARS2Q5ST30 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
VARS2Q5ST30 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC7.08□□□□□ -1.28
VARS2Q5ST30 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
VARS2Q5ST30 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
VARS2Q5ST30 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
VARS2Q5ST30 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VARS2Q5ST30 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.08□□□□□ -1.28
VARS2Q5ST30 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.08□□□□□ -1.28
VARS2Q5ST30 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
VARS2Q5ST30 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC7.07□□□□□ -1.28
VARS2Q5ST30 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC7.07□□□□□ -1.28
VARS2Q5ST30 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
VARS2Q5ST30 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
VARS2Q5ST30 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
VARS2Q5ST30 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.07□□□□□ -1.28
VARS2Q5ST30 RN7SKP78-201ENST00000364711 318 ntBASIC7.07□□□□□ -1.28
VARS2Q5ST30 RNU6-444P-201ENST00000383988 108 ntBASIC7.07□□□□□ -1.28
VARS2Q5ST30 MIR320B1-201ENST00000390209 79 ntBASIC7.07□□□□□ -1.28
VARS2Q5ST30 PRELID1P1-201ENST00000403549 660 ntBASIC7.07□□□□□ -1.28
VARS2Q5ST30 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
VARS2Q5ST30 Y_RNA.590-201ENST00000410140 107 ntBASIC7.07□□□□□ -1.28
VARS2Q5ST30 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.07□□□□□ -1.28
VARS2Q5ST30 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC7.07□□□□□ -1.28
VARS2Q5ST30 RAC1P7-201ENST00000445367 377 ntBASIC7.07□□□□□ -1.28
VARS2Q5ST30 AC021074.2-201ENST00000468434 172 ntBASIC7.07□□□□□ -1.28
VARS2Q5ST30 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.07□□□□□ -1.28
VARS2Q5ST30 AC018797.1-201ENST00000510791 255 ntBASIC7.07□□□□□ -1.28
VARS2Q5ST30 AC074255.1-201ENST00000511259 501 ntBASIC7.07□□□□□ -1.28
VARS2Q5ST30 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC7.07□□□□□ -1.28
VARS2Q5ST30 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.07□□□□□ -1.28
VARS2Q5ST30 AP003396.4-201ENST00000527574 265 ntBASIC7.07□□□□□ -1.28
VARS2Q5ST30 AC006512.2-201ENST00000543250 486 ntBASIC7.07□□□□□ -1.28
VARS2Q5ST30 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.07□□□□□ -1.28
VARS2Q5ST30 MIR5701-3-201ENST00000578890 82 ntBASIC7.07□□□□□ -1.28
VARS2Q5ST30 MIR5701-1-201ENST00000585138 82 ntBASIC7.07□□□□□ -1.28
VARS2Q5ST30 AC023813.4-201ENST00000607580 580 ntBASIC7.07□□□□□ -1.28
VARS2Q5ST30 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC7.07□□□□□ -1.28
VARS2Q5ST30 MIR5701-2-201ENST00000615634 82 ntBASIC7.07□□□□□ -1.28
VARS2Q5ST30 AC097372.5-201ENST00000623665 376 ntBASIC7.07□□□□□ -1.28
VARS2Q5ST30 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
VARS2Q5ST30 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.07□□□□□ -1.28
VARS2Q5ST30 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
VARS2Q5ST30 AC097063.1-201ENST00000426714 1797 ntBASIC7.07□□□□□ -1.28
VARS2Q5ST30 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC7.07□□□□□ -1.28
VARS2Q5ST30 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
VARS2Q5ST30 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.07□□□□□ -1.28
VARS2Q5ST30 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
VARS2Q5ST30 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
VARS2Q5ST30 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.07□□□□□ -1.28
VARS2Q5ST30 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VARS2Q5ST30 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.06□□□□□ -1.28
VARS2Q5ST30 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
VARS2Q5ST30 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
VARS2Q5ST30 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.06□□□□□ -1.28
VARS2Q5ST30 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VARS2Q5ST30 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
VARS2Q5ST30 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VARS2Q5ST30 RNU6-960P-201ENST00000364056 120 ntBASIC7.06□□□□□ -1.28
VARS2Q5ST30 RNA5SP512-201ENST00000364550 120 ntBASIC7.06□□□□□ -1.28
VARS2Q5ST30 RNU6-715P-201ENST00000365204 103 ntBASIC7.06□□□□□ -1.28
VARS2Q5ST30 RNU6-1329P-201ENST00000365664 107 ntBASIC7.06□□□□□ -1.28
VARS2Q5ST30 SNORA51.6-201ENST00000384151 125 ntBASIC7.06□□□□□ -1.28
VARS2Q5ST30 RNA5SP431-201ENST00000410312 120 ntBASIC7.06□□□□□ -1.28
VARS2Q5ST30 RNU2-61P-201ENST00000411069 191 ntBASIC7.06□□□□□ -1.28
VARS2Q5ST30 RPL23AP4-201ENST00000427757 463 ntBASIC7.06□□□□□ -1.28
VARS2Q5ST30 BX679664.1-201ENST00000434429 253 ntBASIC7.06□□□□□ -1.28
VARS2Q5ST30 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC7.06□□□□□ -1.28
VARS2Q5ST30 RPL23AP60-201ENST00000450011 454 ntBASIC7.06□□□□□ -1.28
VARS2Q5ST30 snoU13.8-201ENST00000458890 104 ntBASIC7.06□□□□□ -1.28
VARS2Q5ST30 AC005017.1-201ENST00000482002 490 ntBASIC7.06□□□□□ -1.28
VARS2Q5ST30 RPS17P5-201ENST00000498293 408 ntBASIC7.06□□□□□ -1.28
VARS2Q5ST30 AC113367.2-201ENST00000505749 160 ntBASIC7.06□□□□□ -1.28
VARS2Q5ST30 Y_RNA.679-201ENST00000516416 91 ntBASIC7.06□□□□□ -1.28
VARS2Q5ST30 SCARNA21.2-201ENST00000516600 166 ntBASIC7.06□□□□□ -1.28
VARS2Q5ST30 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC7.06□□□□□ -1.28
VARS2Q5ST30 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.06□□□□□ -1.28
VARS2Q5ST30 LSM6P2-201ENST00000552208 177 ntBASIC7.06□□□□□ -1.28
VARS2Q5ST30 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC7.06□□□□□ -1.28
VARS2Q5ST30 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.06□□□□□ -1.28
VARS2Q5ST30 AC004232.1-201ENST00000571388 208 ntBASIC7.06□□□□□ -1.28
VARS2Q5ST30 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
VARS2Q5ST30 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC7.06□□□□□ -1.28
VARS2Q5ST30 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
VARS2Q5ST30 AL121917.1-203ENST00000605534 577 ntBASIC7.06□□□□□ -1.28
VARS2Q5ST30 AL591516.1-201ENST00000611326 274 ntBASIC7.06□□□□□ -1.28
VARS2Q5ST30 CENPF-206ENST00000614578 528 ntTSL 5 BASIC7.06□□□□□ -1.28
VARS2Q5ST30 AC084757.4-201ENST00000616350 526 ntBASIC7.06□□□□□ -1.28
VARS2Q5ST30 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
VARS2Q5ST30 U6.92-201ENST00000636464 89 ntBASIC7.06□□□□□ -1.28
VARS2Q5ST30 MAPK10-365ENST00000641902 3825 ntBASIC7.06□□□□□ -1.28
VARS2Q5ST30 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
VARS2Q5ST30 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms